DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trxr-1 and Txnrd1

DIOPT Version :9

Sequence 1:NP_727251.1 Gene:Trxr-1 / 31760 FlyBaseID:FBgn0020653 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_001035988.1 Gene:Txnrd1 / 50493 MGIID:1354175 Length:613 Species:Mus musculus


Alignment Length:562 Identity:285/562 - (50%)
Similarity:360/562 - (64%) Gaps:28/562 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 LTGQRGSRDSTGATGGNAPAGSGAGAP------PPFQHPHCDRAAMYAQ--------PVRKMSTK 109
            |.|.||:...........|:.|....|      ||...|. .|.....|        .::|:.|.
Mouse    52 LRGPRGAVLPASRPSKTLPSSSQTPCPTDPCICPPPSTPD-SRQEKNTQSELPNKKGQLQKLPTM 115

  Fly   110 G------GSYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCI 168
            .      ||||:|||:|||||.|||.||||.....:|..||||.||| |||:||:||||||||||
Mouse   116 NGSKDPPGSYDFDLIIIGGGSGGLAAAKEAAKFDKKVLVLDFVTPTP-LGTRWGLGGTCVNVGCI 179

  Fly   169 PKKLMHQASLLGEAVHEAAAYGWNVDEKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYING 233
            ||||||||:|||:|:.::..|||.|::.:|.||.|:.:|||:||.|:||..||.||:|||.|.|.
Mouse   180 PKKLMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQSHIGSLNWGYRVALREKKVVYENA 244

  Fly   234 LGSFVDSHTLLAKLKSG-ERTITAQTFVIAVGGRPRYPDIPGAVEYGITSDDLFSLDREPGKTLV 297
            .|.|:..|.::|....| |:..:|:.|:||.|.||||..|||..||.|:|||||||...||||||
Mouse   245 YGRFIGPHRIVATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLV 309

  Fly   298 VGAGYIGLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQD 362
            |||.|:.|||||||.|:|.:.|||||||:||||||.||..:...|||.||.|:|:.||..:|:.:
Mouse   310 VGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPTKIEQIE 374

  Fly   363 ---DGKLLVKYKNVETGEEAEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK--DKIPVDSQEATN 422
               .|:|.|..::..:.|..|..::|||.|:||......:.|...||.:.:  .||||..:|.||
Mouse   375 AGTPGRLRVTAQSTNSEETIEGEFNTVLLAVGRDSCTRTIGLETVGVKINEKTGKIPVTDEEQTN 439

  Fly   423 VANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDA 487
            |..|||:|||:.||.||||||:.||||||:||||||..:.||.:|.|||||||||.|.|||||.|
Mouse   440 VPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGGSNVKCDYDNVPTTVFTPLEYGCCGLSEEKA 504

  Fly   488 VKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAA 552
            |::||.:.|||:|.::.|.|:.:|.:....||.|.:.....|:||.|.|.:||.||||.||||||
Mouse   505 VEKFGEENIEVYHSFFWPLEWTVPSRDNNKCYAKIICNLKDDERVVGFHVLGPNAGEVTQGFAAA 569

  Fly   553 LKSGLTINTLINTVGIHPTTAEEFTRLAITKRSGLDPTPASC 594
            ||.|||...|.:|:||||..||.||.|::|||||.|...:.|
Mouse   570 LKCGLTKQQLDSTIGIHPVCAEIFTTLSVTKRSGGDILQSGC 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trxr-1NP_727251.1 TGR 113..595 CDD:273624 269/488 (55%)
NADB_Rossmann 115..>150 CDD:304358 21/34 (62%)
Pyr_redox 294..368 CDD:278498 44/76 (58%)
Pyr_redox_dim 468..577 CDD:280934 59/108 (55%)
Txnrd1NP_001035988.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 57..121 11/64 (17%)
TGR 125..613 CDD:273624 269/488 (55%)
Pyr_redox 306..382 CDD:278498 43/75 (57%)
Pyr_redox_dim 485..595 CDD:280934 60/109 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 130 1.000 Domainoid score I5178
eggNOG 1 0.900 - - E1_COG1249
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.928771 Normalized mean entropy S1111
OMA 1 1.010 - - QHG57703
OrthoDB 1 1.010 - - D164705at33208
OrthoFinder 1 1.000 - - FOG0000578
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100956
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.680

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