DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trxr1 and Aifm3

DIOPT Version :10

Sequence 1:NP_727251.1 Gene:Trxr1 / 31760 FlyBaseID:FBgn0020653 Length:596 Species:Drosophila melanogaster
Sequence 2:XP_008767097.1 Gene:Aifm3 / 303786 RGDID:1306028 Length:608 Species:Rattus norvegicus


Alignment Length:487 Identity:102/487 - (20%)
Similarity:178/487 - (36%) Gaps:125/487 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 MSTKGGSYDYDLIVIGGGSAGLACAKEAVLNGAR---VAC-LDFVKPTPTLGTKWGVGGTCVNVG 166
            :|...|....:::::|.|:|||.||:.....|..   |.| ||...|.........:......:.
  Rat   185 ISPSAGHSSTNVLIVGAGAAGLVCAETLRQEGFSDRIVLCTLDRHLPYDRAKLSKSLDAQPEQLA 249

  Fly   167 CIPKKLMHQASLLGEAVHEAAAYGWNVDEKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYI 231
            ..||:...             |||           .:::...|        |..||:|:|||.:.
  Rat   250 LRPKEFFR-------------AYG-----------IEMLTEAQ--------VVTVDVRNKKVVFK 282

  Fly   232 NGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEYGITSDDLFSLDREP---- 292
            :|..  ::...||....|..:|:|.:                     |...:::|:: |.|    
  Rat   283 DGFK--LEYSKLLLAPGSSPKTLTCK---------------------GKDIENVFTI-RTPEDAN 323

  Fly   293 -------GK-TLVVGAGYIGLECAGFLKGLGYEPTVM-VRSIVLRGF-DQQMAELVAASMEERGI 347
                   |: .:|||||::|:|.|.:|....:..:|: :.....|.| .:::...:....|...:
  Rat   324 RVLRLARGRNAVVVGAGFLGMEVAAYLTEKAHSVSVVELEETPFRRFLGERVGRALMKMFENNRV 388

  Fly   348 PFLRKTVPLSVEKQDDGKL---LVKYKNVETGEEAEDVYDTVLWAIGRKGLVDDLNLPNAGVTV- 408
            .|..:| .:|..:..:|||   ::|...|...    ||....:.|:...|.     |..:|:.: 
  Rat   389 KFYMQT-EVSELRAQEGKLQEVVLKSSKVLRA----DVCVVGIGAVPATGF-----LRQSGIGLD 443

  Fly   409 QKDKIPVDSQEATNVANIYAVGDII-------YGKPELTP---VAVLAGRLLARRLYGGSTQRMD 463
            .:..|||:....||:..::|.||.:       ..:....|   :|...||:.|:.:.....:...
  Rat   444 SRGFIPVNKMMQTNIPGVFAAGDAVTFPLAWRNNRKVNIPHWQMAHAQGRVAAQNMLAQEAEINT 508

  Fly   464 YKDVATTVF-TPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERH 527
            ...:.|.:| ..|.||..|...:|.:.|...:|::....|.|..|..            |||..:
  Rat   509 VPYLWTAMFGKSLRYAGYGEGFDDVIIQGDLEELKFVAFYTKGDEVI------------AVASMN 561

  Fly   528 GDQRVYGLHYIGPVAGEVIQGFAAALKSGLTI 559
            .|          |:..:|    |..|.||..|
  Rat   562 YD----------PIVSKV----AEVLASGRAI 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trxr1NP_727251.1 DAO 59..>160 CDD:477422 15/57 (26%)
TGR 113..595 CDD:273624 100/480 (21%)
Aifm3XP_008767097.1 Rieske_AIFL_N 70..163 CDD:239560
NirB 193..561 CDD:440863 92/445 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.