DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trxr-1 and Gsr

DIOPT Version :9

Sequence 1:NP_727251.1 Gene:Trxr-1 / 31760 FlyBaseID:FBgn0020653 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_034474.4 Gene:Gsr / 14782 MGIID:95804 Length:500 Species:Mus musculus


Alignment Length:513 Identity:182/513 - (35%)
Similarity:265/513 - (51%) Gaps:28/513 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 PAGSGAGAPPPFQHPHCDRAAMYAQPVRKMSTKGGSYDYDLIVIGGGSAGLACAKEAVLNGARVA 141
            |...|.||.|..:..........|.|.........:..:|.:||||||.|||.|:.|...|||.|
Mouse     5 PRALGVGAAPSLRRAARALTCAMASPGEPQPPAPDTSSFDYLVIGGGSGGLASARRAAELGARAA 69

  Fly   142 CLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWNVDEKIKPDWHKLVQ 206
            .::..|          :|||||||||:|||:|...::..|.:|:...||:...|. |..||.:.|
Mouse    70 VVESHK----------LGGTCVNVGCVPKKVMWNTAVHSEFMHDHVDYGFQSCEG-KFSWHVIKQ 123

  Fly   207 SVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYP- 270
            ....::..:|.:.:.:|....:|.|:|..:|.|......::..  :..||...:||.||.|..| 
Mouse   124 KRDAYVSRLNTIYQNNLTKSHIEIIHGYATFADGPRPTVEVNG--KKFTAPHILIATGGVPTVPH 186

  Fly   271 --DIPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVR-SIVLRGFDQ 332
              .|||| ..|||||..|.|:..|.::::||||||.:|.||.|..||.:.::|:| ..|||.||.
Mouse   187 ESQIPGA-SLGITSDGFFQLEDLPSRSVIVGAGYIAVEIAGILSALGSKTSLMIRHDKVLRNFDS 250

  Fly   333 QMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNV----ETGEEAEDVYDTVLWAIGRK 393
            .::......:|..|:..|:.|....|:|...|..|....:|    .|.....|| |.:||||||.
Mouse   251 LISSNCTEELENAGVEVLKFTQVKEVKKTSSGLELQVVTSVPGRKPTTTMIPDV-DCLLWAIGRD 314

  Fly   394 GLVDDLNLPNAGV-TVQKDKIPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYG- 456
            .....|||...|: |.:|..|.||..:.|||..:|||||:. ||..|||||:.|||.||.||:. 
Mouse   315 PNSKGLNLNKVGIQTDEKGHILVDEFQNTNVKGVYAVGDVC-GKALLTPVAIAAGRKLAHRLFEC 378

  Fly   457 GSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLK 521
            ....::||.::.|.||:......|||:|::||.::|.|.::::...:.|....:..:..: |.:|
Mouse   379 KQDSKLDYDNIPTVVFSHPPIGTVGLTEDEAVHKYGKDNVKIYSTAFTPMYHAVTTRKTK-CVMK 442

  Fly   522 AVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRL 579
            .|. .:.:::|.|:|..|....|::||||.|:|.|.|.....|||.||||::||...|
Mouse   443 MVC-ANKEEKVVGIHMQGIGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTL 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trxr-1NP_727251.1 TGR 113..595 CDD:273624 175/477 (37%)
NADB_Rossmann 115..>150 CDD:304358 17/34 (50%)
Pyr_redox 294..368 CDD:278498 26/74 (35%)
Pyr_redox_dim 468..577 CDD:280934 37/108 (34%)
GsrNP_034474.4 gluta_reduc_1 42..500 CDD:273614 175/476 (37%)
Pyr_redox 211..287 CDD:278498 27/75 (36%)
Pyr_redox_dim 390..498 CDD:280934 37/109 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1249
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D164705at33208
OrthoFinder 1 1.000 - - FOG0000578
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R529
SonicParanoid 1 1.000 - - X1089
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.850

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