DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trxr1 and Gsr

DIOPT Version :10

Sequence 1:NP_727251.1 Gene:Trxr1 / 31760 FlyBaseID:FBgn0020653 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_446358.2 Gene:Gsr / 116686 RGDID:621747 Length:410 Species:Rattus norvegicus


Alignment Length:421 Identity:146/421 - (34%)
Similarity:221/421 - (52%) Gaps:26/421 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 MHQASLLGEAVHEAAAYGWNVDEKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSF 237
            |...::..|.:|:...||:. :.|.|.:||.:.:....::..:|.:.:.:|....:|.|:|..:|
  Rat     1 MWNTAVHSEFIHDHVDYGFQ-NCKSKFNWHVIKEKRDAYVSRLNNIYQNNLTKSHIEVIHGYATF 64

  Fly   238 VDSHTLLAKLKSGERTITAQTFVIAVGGRPRYP---DIPGAVEYGITSDDLFSLDREPGKTLVVG 299
            .|......::..  :..||...:||.||.|..|   .|||| ..|||||..|.|:..|.::::||
  Rat    65 ADGPQPTVEVNG--KKFTAPHILIATGGVPTVPHENQIPGA-SLGITSDGFFQLEDLPSRSVIVG 126

  Fly   300 AGYIGLECAGFLKGLGYEPTVMVR-SIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDD 363
            ||||.:|.||.|..||.:.::|:| ..|||.||..::......:|..|:..|:.:....|:|...
  Rat   127 AGYIAVEIAGILSALGSKTSLMIRHDKVLRSFDSLISSNCTEELENAGVEVLKFSQVKEVKKTPS 191

  Fly   364 GKLLVKYKNVETG--------EEAEDVYDTVLWAIGRKGLVDDLNLPNAGV-TVQKDKIPVDSQE 419
            |..|    :|.|.        ....|| |.:||||||......|||...|: |..|..|.||..:
  Rat   192 GLEL----HVVTALPGRKPTVTTIPDV-DCLLWAIGRDPNSKGLNLNKLGIQTDDKGHILVDEFQ 251

  Fly   420 ATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLY-GGSTQRMDYKDVATTVFTPLEYACVGLS 483
            .|||..:|||||:. ||..|||||:.|||.||.||: |....|:||.::.|.||:......|||:
  Rat   252 NTNVKGVYAVGDVC-GKALLTPVAIAAGRKLAHRLFEGKEDSRLDYDNIPTVVFSHPPIGTVGLT 315

  Fly   484 EEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQG 548
            |::||.::|.|.::::...:.|....:..:..: |.:|.|. .:.:::|.|:|..|....|::||
  Rat   316 EDEAVHKYGKDNVKIYSTAFTPMYHAVTTRKTK-CVMKMVC-ANKEEKVVGIHMQGIGCDEMLQG 378

  Fly   549 FAAALKSGLTINTLINTVGIHPTTAEEFTRL 579
            ||.|:|.|.|.....|||.||||::||...|
  Rat   379 FAVAVKMGATKADFDNTVAIHPTSSEELVTL 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trxr1NP_727251.1 DAO 59..>160 CDD:477422
TGR 113..595 CDD:273624 146/421 (35%)
GsrNP_446358.2 Pyr_redox_2 1..410 CDD:476868 146/421 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.