DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trxr1 and LOC100498581

DIOPT Version :10

Sequence 1:NP_727251.1 Gene:Trxr1 / 31760 FlyBaseID:FBgn0020653 Length:596 Species:Drosophila melanogaster
Sequence 2:XP_002936104.2 Gene:LOC100498581 / 100498581 XenbaseID:XB-GENE-29084323 Length:530 Species:Xenopus tropicalis


Alignment Length:491 Identity:107/491 - (21%)
Similarity:180/491 - (36%) Gaps:164/491 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QCSTILTSPSAGIIQNRGSLTTKVPHWISSSLSCAHHTFQRTMNLTGQRGSRDSTGATGG----- 74
            |..|||...|.|:....||             .|.|:            |:..|.|...|     
 Frog    28 QGQTILLVKSNGVFTAVGS-------------KCTHY------------GAPLSKGVLSGNRIRC 67

  Fly    75 -------NAPAGS-----GAGAPPPFQHP--------HCDRAAM-YAQPVRKMSTKGGSYDYDLI 118
                   |...|.     |..:.|.|:..        :.:|.|: ..:.|::||........:::
 Frog    68 PWHGACFNIETGDIEEYPGLDSLPCFEVTVENGKVLLNANRKALENPKRVKEMSRHYNGDRTNIV 132

  Fly   119 VIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAV 183
            :||.|.|.|.||:                   ||..: |..|..|.| ...|.|.:..:.|.:|:
 Frog   133 LIGSGPAALVCAE-------------------TLRQE-GYKGRIVMV-TREKHLPYDRTKLSKAM 176

  Fly   184 HEAAAYGWNVDEKIKPDWHKLVQSVQNHIKSVNWVTRVDLR---DKKVEYIN---GLGSFVDSHT 242
            :                    |::...:::|.::.:..|:.   :|:|..||   |...|.|:.|
 Frog   177 N--------------------VKAKDIYLRSEDFFSSYDIEVWTEKEVVSINTDEGKVKFRDNST 221

  Fly   243 LLAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEYGI----TSDDLFSLDREP-GKTLVV-GAG 301
            |           .....:||.|.|||....||:....:    :.||..::.... ||.:|: |..
 Frog   222 L-----------QYSQLLIATGSRPRELTCPGSSLQNVFLLRSPDDANAISEAAIGKNVVIMGTS 275

  Fly   302 YIGLECAGFLKGLGYEPTVMVRS-----IVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQ 361
            :||:|.|.||.......:|:.||     .||   ..::.|:....::|:|:.|..:|....:.  
 Frog   276 FIGMEVAAFLSDKASSVSVIGRSEFPFQAVL---GPKVGEVAMKLLQEKGVSFYSRTEAREIR-- 335

  Fly   362 DDGKLLVKYKNVETGEEAEDVYDTVLWAIGRKG--LVDDLNLPNAGVT-----VQKDKIPVDSQE 419
                          ||..: |.:.||    |.|  |..|:.:...|||     ::..:|.||::.
 Frog   336 --------------GENGQ-VREVVL----RNGSKLPADVVVAGIGVTPASNFLKGSRIAVDTRG 381

  Fly   420 A--------TNVANIYAVGDIIYGKPELTPVAVLAG 447
            |        |:|.::||.||::     ..|::::.|
 Frog   382 AIFVDQFMRTSVPDVYAAGDVV-----SFPLSIMEG 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trxr1NP_727251.1 DAO 59..>160 CDD:477422 24/126 (19%)
TGR 113..595 CDD:273624 83/367 (23%)
LOC100498581XP_002936104.2 Rieske_AIFL_N 10..103 CDD:239560 19/99 (19%)
NirB 128..524 CDD:440863 83/366 (23%)

Return to query results.
Submit another query.