Protein Alignment Ppef1 and rdgC

DIOPT Version :9

• Sequence 1: XP_038955765.1
• Gene: Ppef1 / 317498
• RGDID: 1562772
• Length: 664
• Species: Rattus norvegicus
• Sequence 2: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Alignment Length: 641
• Identity: 259/641 - (40%)
• Similarity: 384/641 - (59%)
• Gaps: 51/641 - (7%)

  Rat    41 VRAALIIQNWYRRYRARLSARQHYALAIFQSIEYADEQGQMQLSSFFSFMLENY-----TNTHKE 100
            :|||:.||.||||::||...::.....|||::|||.||.|.:|..||:.::::.     .....:
  Fly    91 IRAAIFIQKWYRRHQARREMQRRCNWQIFQNLEYASEQDQAELYKFFNDLIKHMPQAAGRKNQYQ 155

  Rat   101 DSALVSRLFENTRLESKDR--EEYVGLIDVPDSYDGPRLQFPLTFTDINLLLQAFKQQQ--TLHA 161
            .||.||      .|:.||.  ||:..:::.       :::.|:....|:||:..|::::  .||.
  Fly   156 GSAHVS------VLDDKDDLVEEFGDIVNA-------KIELPIRKNHIDLLIDVFRKKRGNRLHP 207

  Rat   162 HYVLEVLFEARKILKQMPNFTRIQTFPAKEITICGDLHGKLDDLMLIFYKNGLPSEKNPYVFNGD 226
            .||..:|.||.|.|||:||.:.:.|..::::|:|||||||||||:::.:||||||..||||||||
  Fly   208 KYVALILREAAKSLKQLPNISPVSTAVSQQVTVCGDLHGKLDDLLVVLHKNGLPSSSNPYVFNGD 272

  Rat   227 FVDRGNNSMEILMILLVSFLVYPTDLHLNRGNHEDFMMNLRYGFTKEILQKYKLHGKKILQVLEE 291
            |||||...:|:|::||..:|.:|..:.||||||||.:||.||||.:|:..||..:.|:||..::|
  Fly   273 FVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFIREVESKYPRNHKRILAFIDE 337

  Rat   292 LYTWLPIGTIIDNEILVIHGGISESTDLNILQQLQRNKMKSVLMPPMSTNQECNIKKNKAGPSEQ 356
            :|.|||:|:::::.:|::|||.|:||.|::::.:.|.|..|:|.||::.
  Fly   338 VYRWLPLGSVLNSRVLIVHGGFSDSTSLDLIKSIDRGKYVSILRPPLTD---------------- 386

  Rat   357 SASEQLTKLEWEQIIDLLWSDPRGKKGCYPNTSRGGGCYFGPDVTSKVLNKNQLKMVIRSHECKP 421
              .|.|.|.||:||.|::||||:...||.|||.||.|.:||||||...|.:::|..|||||||||
  Fly   387 --GEPLDKTEWQQIFDIMWSDPQATMGCVPNTLRGAGVWFGPDVTDNFLQRHRLSYVIRSHECKP 449

  Rat   422 DGYEICHDGKVITVFSASNYYEEGSNRGAYIRLSYGTSPQFFQY--QVTSTSCLNPLYQRVNAME 484
            :|:|..||.|:||:|||||||..|||:||||||:....|.|.||  ..:.|..|: ..||:..:|
  Fly   450 NGHEFMHDNKIITIFSASNYYAIGSNKGAYIRLNNQLMPHFVQYISAASQTKRLS-FKQRMGIVE 513

  Rat   485 FSAFRILKERMIARKTDLINAFELRDHSRTGKISLAQWAFSMESILGLNLPWRSLSSHLVSTDSS 549
            .||.:.|..||...:.:|.:.|...|...:|.||::.|...||::..|.||||.|...|.....|
  Fly   514 SSALKELAVRMRDHRDELEDEFRKYDPKDSGYISISHWCKVMENVTKLGLPWRLLRDKLAPGTDS 578

  Rat   550 GSVDYMSSFD----DIHIEKPMKDMKSDLIETMYRYRSDLKIIFNIIDTDQSGLISMDEFRTMWK 610
            ..|:|..:.|    |:.:|.....|  .:::.:|..::.|..||||||.|.||.|::|||.|...
  Fly   579 QKVNYNRTLDLLDTDVILEAEADGM--SVMDALYANKASLVAIFNIIDADNSGEITLDEFETAID 641

  Rat   611 LFNAHYKVHIDDSQIDELASTMDSNKDGNIDFNEFLRAFYV--VHKYETPESPLNK 664
            |..||.......:::.|....||.|.||.:|.||||.||.:  :|:.|..:..:.:
  Fly   642 LLVAHMPGAYSKAEMLEKCRMMDLNGDGKVDLNEFLEAFRLSDLHRKEQQDENIRR 697

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ppef1	XP_038955765.1	IQ	40..>57	CDD:197470	9/15 (60%)
		MPP_RdgC	140..466	CDD:277364	160/329 (49%)
		PTZ00183	505..647	CDD:185503	51/145 (35%)
		EF-hand_7	582..650	CDD:404394	30/67 (45%)
rdgC	NP_536738.3	IQ	89..111	CDD:197470	11/19 (58%)
		MPP_RdgC	184..494	CDD:277364	159/327 (49%)
		EFh	616..681	CDD:238008	30/64 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166335040
Domainoid	1	1.000	260	1.000	Domainoid score	I1916
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	555	1.000	Inparanoid score	I1073
OMA	1	1.010	-	-		QHG59402
OrthoDB	1	1.010	-	-		D215218at33208
OrthoFinder	1	1.000	-	-		FOG0000018
OrthoInspector	1	1.000	-	-		oto98350
orthoMCL	1	0.900	-	-		OOG6_105509
Panther	1	1.100	-	-	O	PTHR45668
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X2939
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	13	12.910