DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10761 and Marchf1

DIOPT Version :10

Sequence 1:NP_572456.1 Gene:CG10761 / 31749 FlyBaseID:FBgn0030015 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_017455664.2 Gene:Marchf1 / 361135 RGDID:1305148 Length:542 Species:Rattus norvegicus


Alignment Length:247 Identity:57/247 - (23%)
Similarity:95/247 - (38%) Gaps:71/247 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SGLE-----PPSGNVVDD-----RMCWIC-LRGDEDHRRRDWVHPCRCRGTNKWVHEACLSRWID 72
            |||:     ..|....||     .:|.|| ..|||:   ...:.||||.||.::||::||.:||.
  Rat   308 SGLQLNTSTQKSPGADDDGSENFEVCRICHCEGDEE---SPLITPCRCTGTLRFVHQSCLHQWIK 369

  Fly    73 EKEMLSPGAPVTCTQCRTEYII--VMPPLCRFDAMLERLDKGCDRMCPSVLMGILAAT-VYFSAV 134
            ..:..      .|..|:.::|:  .:.||.:::.:.....:.....| ||...::|.| |.:|..
  Rat   370 SSDTR------CCELCKYDFIMETKLKPLRKWEKLQMTTSERRKIFC-SVTFHVIAVTCVVWSLY 427

  Fly   135 IY--------------GAL-------TVLQLAGYSTGMKLLQEDPSLLMIVLPSV-----PTLLL 173
            :.              |.|       .|:...|::.|:        :.|.|...|     ..|..
  Rat   428 VLIDRTAEEIKQGNDNGVLEWPFWTKLVVVAIGFTGGL--------VFMYVQCKVYVQLWRRLKA 484

  Fly   174 LSRLVRWEDC--VIRWLRRRKRSAIPAEQLDAVGLPLP-----------GAP 212
            .:|::..::|  ....|.:.....:..|..|||.:|:|           |||
  Rat   485 YNRVIFVQNCPDTANKLEKNFPCNVNTEGKDAVVVPVPQTGSNTLPTAEGAP 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10761NP_572456.1 RING_CH-C4HC3_MARCH5 32..92 CDD:438361 20/60 (33%)
Marchf1XP_017455664.2 RING_Ubox 331..396 CDD:473075 23/73 (32%)

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