DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10761 and marc-6

DIOPT Version :9

Sequence 1:NP_572456.1 Gene:CG10761 / 31749 FlyBaseID:FBgn0030015 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_492823.2 Gene:marc-6 / 172986 WormBaseID:WBGene00018847 Length:1025 Species:Caenorhabditis elegans


Alignment Length:131 Identity:38/131 - (29%)
Similarity:56/131 - (42%) Gaps:47/131 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EPPSGNVVDDR----MCWICLRGDEDHRRRDWVHPCRCRGTNKWVHEACLSRWI--DEKEMLSPG 80
            :|||..::||.    ||.:| ||:|.    ...:||.|.|:.|:||:.||..|:  .:||:    
 Worm    37 QPPSDPIIDDNDDHLMCRVC-RGNEG----SLYYPCLCTGSIKYVHQECLVEWLKYSKKEV---- 92

  Fly    81 APVTCTQCRTEYIIVMPPLCRFD-----AMLERLDKGCDRMCPSVLMGILAATVYFSAVIYGALT 140
                |..|..:|  ...|:.|.|     .:||            :|.|:|         |.||:.
 Worm    93 ----CELCNHKY--SFQPIYRQDMPKALPILE------------ILRGVL---------ISGAIM 130

  Fly   141 V 141
            |
 Worm   131 V 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10761NP_572456.1 RINGv 33..89 CDD:128983 19/57 (33%)
marc-6NP_492823.2 SSM4 47..1016 CDD:227510 33/121 (27%)
RING_CH-C4HC3_MARCH6 52..98 CDD:319616 20/58 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R328
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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