DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GIIIspla2 and Pla2g2d

DIOPT Version :9

Sequence 1:NP_001285008.1 Gene:GIIIspla2 / 31747 FlyBaseID:FBgn0030013 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001013446.1 Gene:Pla2g2d / 298579 RGDID:1309862 Length:144 Species:Rattus norvegicus


Alignment Length:79 Identity:24/79 - (30%)
Similarity:33/79 - (41%) Gaps:25/79 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 GTYNDLGGASK----ADKCCRKHDHC--KMWIDGMSNRYDLFNYRPYTLSH-------------- 144
            |.:...||..:    .|.||:|||.|  .:.|||..:..|  ||: |::|.              
  Rat    44 GCHCGFGGKGQPKDATDWCCQKHDCCYAHLKIDGCKSLTD--NYK-YSISEGVIQCSDQGSWCER 105

  Fly   145 --CSCDLRFRTCLK 156
              |:||.....|||
  Rat   106 QLCACDKEVALCLK 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GIIIspla2NP_001285008.1 PLA2_bee_venom_like 84..181 CDD:153093 24/79 (30%)
Pla2g2dNP_001013446.1 PLA2c 20..137 CDD:153091 24/79 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1422829at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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