DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Traf6 and TRAF5

DIOPT Version :9

Sequence 1:NP_511080.2 Gene:Traf6 / 31746 FlyBaseID:FBgn0265464 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_011508259.1 Gene:TRAF5 / 7188 HGNCID:12035 Length:631 Species:Homo sapiens


Alignment Length:632 Identity:134/632 - (21%)
Similarity:224/632 - (35%) Gaps:203/632 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 MTTNLSS----------------TGRIAASSSATP------------SAAAGGGASGAPTPPKSL 75
            ||.:.||                :.|..|...|:|            :||......||..|..::
Human     1 MTVSASSRPLPARPLFPCARPRPSARAPAPPQASPPLRRRRRPQPGAAAAPADRPRGARAPSPTM 65

  Fly    76 ALNQNHHYAP--------GSDTSGEQEE-------ELLDSRYECAICIDWLNEPVLTSCGHRFCR 125
            |.::.|...|        |:..|.:.|.       |.|:.||:||.|...|:.|..|.||||||:
Human    66 AYSEEHKGMPCGFIRQNSGNSISLDFEPSIEYQFVERLEERYKCAFCHSVLHNPHQTGCGHRFCQ 130

  Fly   126 SCLTAWMQKNN-QCCPMDNKRLSAEHDIFPDNYTRREIEQLKRDCPNSSLGCSV----------V 179
            .|:.:..:.|. ..||:| |.:....::|.||..:||:..|...|.|:. ||:.          :
Human   131 HCILSLRELNTVPICPVD-KEVIKSQEVFKDNCCKREVLNLYVYCSNAP-GCNAKVILGRYQVPL 193

  Fly   180 ASPIELHRHLPSCPYRRQQ-------EPQEEK---------CPFAKIKCDFVGR----------- 217
            |....|..||..|.::..|       ||...|         |.|.|.||.:..:           
Human   194 ACCYLLQDHLQQCLFQPVQCSNEKCREPVLRKDLKEHLSASCQFRKEKCLYCKKDVVVINLQNHE 258

  Fly   218 -------------------------------PETNQ-----------------LEEHLKADMPHH 234
                                           ||..|                 |::|..:.:..|
Human   259 ENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEAEQDCPFKHYGCAVTDKRRNLQQHEHSALREH 323

  Fly   235 MQLMLQAFQQTAIATWQPHKP-----------------------------STSGAAVEN-----G 265
            |:|:|:...|........||.                             ..:|:.:.|     .
Human   324 MRLVLEKNVQLEEQISDLHKSLEQKESKIQQLAETIKKLEKEFKQFAQLFGKNGSFLPNIQVFAS 388

  Fly   266 H------------------GQQQ----LPPPPQYANGVDEQI--VQTMYQRIVVLEQRTREQETR 306
            |                  .|||    |.|..:..:.|.::|  ::...||:.|||:.|.:.:|.
Human   389 HIDKSAWLEAQVHQLLQMVNQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTH 453

  Fly   307 LENMQKQLRLARQQAP-VDPRYSNGTIVWRIEQLGALVARLRANANNQVYSHECYTSPHGYKFCA 370
            :...:.||....::.. ::....||.::|::.................::|...|||..||:.||
Human   454 INIHKAQLSKNEERFKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLCA 518

  Fly   371 RLNI----QPRKPHVLSLHVHLMQSENDYHLDWPFKGRIKLCMVHPADATLSQH--DTIMTKPEI 429
            |..:    ..|..| |||:..:|:.|.|..|.|||:.|:.|.::   |.:..::  :|....|..
Human   519 RAYLNGDGSGRGSH-LSLYFVVMRGEFDSLLQWPFRQRVTLMLL---DQSGKKNIMETFKPDPNS 579

  Fly   430 LAFHKP--REAISTRGFGFLEYANISNIIQLGFCADDRLLIKIEINI 474
            .:|.:|  ...|::....|:.::.:.| .:..:..||.|.:|:.:::
Human   580 SSFKRPDGEMNIASGCPRFVAHSVLEN-AKNAYIKDDTLFLKVAVDL 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Traf6NP_511080.2 RING 103..141 CDD:238093 15/38 (39%)
Sina 163..>230 CDD:302762 24/151 (16%)
MATH_TRAF6 330..473 CDD:239745 37/150 (25%)
TRAF5XP_011508259.1 RING 109..145 CDD:214546 14/35 (40%)
zf-TRAF 202..257 CDD:280357 12/54 (22%)
zf-TRAF 257..315 CDD:280357 4/57 (7%)
MATH 478..624 CDD:295307 37/150 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0297
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D391991at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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