Protein Alignment Traf6 and Rnf41

DIOPT Version :9

• Sequence 1: NP_511080.2
• Gene: Traf6 / 31746
• FlyBaseID: FBgn0265464
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: NP_001157709.1
• Gene: Rnf41 / 67588
• MGIID: 1914838
• Length: 317
• Species: Mus musculus
• Alignment Length: 244
• Identity: 57/244 - (23%)
• Similarity: 86/244 - (35%)
• Gaps: 69/244 - (28%)

  Fly    91 GEQEEELLDSRYECAICIDWLNEPV-LTSCGHRFCRSCLTAWMQKNNQCCPMDNKRLSAEHDIFP 154
            |:.:|:|:     |.||...|.||| ...|.|.||.:|:|.|..: .|.||:|...::..|....
Mouse    10 GDVDEDLI-----CPICSGVLEEPVQAPHCEHAFCNACITQWFSQ-QQTCPVDRSVVTVAHLRPV 68

  Fly   155 DNYTRREIEQLKRDCPNSSLGCSVVASPIELHRHLPSCPYRRQQEPQEEKCPFAKIKCDFVGRPE 219
            ....|..:.:|:..|.|:..|||.|.....|..||..|          |..|...:.|      |
Mouse    69 PRIMRNMLSKLQIACDNAVFGCSAVVRLDNLMSHLSDC----------EHNPKRPVTC------E 117

  Fly   220 TNQLEEHLKADMPHHMQLMLQAFQQTAIATWQPHKPSTSGAAVENGHGQQQLPPPPQYANGVDEQ 284
            .....|..|.::|:|..:              .|..|
Mouse   118 QGCGLEMPKDELPNHNCI--------------KHLRS---------------------------- 140

  Fly   285 IVQTMYQRIVVLEQRTREQETRLENMQKQLRL----ARQQAPVDPRYSN 329
            :||....||..||:.:.|.:.:|...::.::|    .|....|:|...|
Mouse   141 VVQQQQSRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQN 189

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Traf6	NP_511080.2	RING	103..141	CDD:238093	16/38 (42%)
		Sina	163..>230	CDD:302762	17/66 (26%)
		MATH_TRAF6	330..473	CDD:239745	57/244 (23%)
Rnf41	NP_001157709.1	mRING-HC-C3HC3D_Nrdp1	15..57	CDD:319548	18/47 (38%)
		modified RING-HC finger (C3HC3D-type)	18..56	CDD:319548	17/38 (45%)
		USP8_interact	137..315	CDD:370198	15/81 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0297
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D918518at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820