Protein Alignment Traf6 and rnf41

DIOPT Version :9

• Sequence 1: NP_511080.2
• Gene: Traf6 / 31746
• FlyBaseID: FBgn0265464
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: NP_998681.1
• Gene: rnf41 / 406837
• ZFINID: ZDB-GENE-040426-2920
• Length: 318
• Species: Danio rerio
• Alignment Length: 328
• Identity: 75/328 - (22%)
• Similarity: 121/328 - (36%)
• Gaps: 99/328 - (30%)

  Fly    91 GEQEEELLDSRYECAICIDWLNEPV-LTSCGHRFCRSCLTAWMQKNNQCCPMDNKRLSAEHDIFP 154
            ||.:|:||     |.||...|.||| ...|.|.||.:|:|.|..: .|.||:|...::..|....
Zfish    10 GEVDEDLL-----CPICSGVLEEPVRAPHCEHAFCNACITQWFAQ-QQICPVDRTVVTLAHLRPV 68

  Fly   155 DNYTRREIEQLKRDCPNSSLGCSVVASPIELHRHLPSCPYR-RQQEPQEEKCPFAKIKCDFVGRP 218
            ....|..:.:|:..|.|:..||:......:|..||..|.:. ::....||.|..
Zfish    69 PRIMRNMLSKLQISCDNAGFGCTATLRLDQLQSHLKDCEHNPKRPVTCEEGCGL----------- 122

  Fly   219 ETNQLEEHLKADMPH-----HMQLMLQAFQQTAIATWQPHKPSTSGAAVENGHGQQQLPPPPQYA 278
                  |..|.:||:     |::.::|. |||.||..:.       .|.|:.|   ||....:
Zfish   123 ------EMPKDEMPNHNCIKHLRSVVQQ-QQTKIADLEK-------TAAEHKH---QLAEQKR-- 168

  Fly   279 NGVDEQIVQTMYQRIVVLEQRTREQETRLENMQKQLRLARQQAPVDPRYSNGTIVW-------RI 336
               |.|:::. |.|.:      |.....|:|:::.:..            |..:.|       |:
Zfish   169 ---DIQLLKA-YMRAI------RSANPNLQNLEESIEY------------NEILEWVNSLQPARV 211

  Fly   337 EQLGALV----ARLRANANNQVYSHECYTSPHGYKFCARLNIQPRKPHVLSLHVHLMQSENDYHL 397
            .:.|.::    |.|:|.....:....|                     .||:...|:  ||.:..
Zfish   212 TRWGGMISTPDAVLQAVIKRSLIDSGC---------------------PLSIVNDLI--ENAHER 253

  Fly   398 DWP 400
            :||
Zfish   254 NWP 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Traf6	NP_511080.2	RING	103..141	CDD:238093	16/38 (42%)
		Sina	163..>230	CDD:302762	14/67 (21%)
		MATH_TRAF6	330..473	CDD:239745	14/82 (17%)
rnf41	NP_998681.1	RING	18..55	CDD:238093	16/37 (43%)
		USP8_interact	137..315	CDD:286082	34/178 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0297
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D918518at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	3.820