Sequence 1: | NP_511080.2 | Gene: | Traf6 / 31746 | FlyBaseID: | FBgn0265464 | Length: | 475 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038968511.1 | Gene: | Traf3 / 362788 | RGDID: | 1304633 | Length: | 610 | Species: | Rattus norvegicus |
Alignment Length: | 610 | Identity: | 115/610 - (18%) |
---|---|---|---|
Similarity: | 212/610 - (34%) | Gaps: | 193/610 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 EEKEHNSNEMTTNLSSTGRIAASSSATPSAAAGGGASGAPTPPKSLALNQNHHYAPGSDTSGEQE 94
Fly 95 E--ELLDSRYECAICIDWLNEPVLTSCGHRFCRSCLTAWMQKNNQCCPMDNKRLSAEHDIFPDNY 157
Fly 158 TRREIEQLKRDCPNSSLGC--SVVASPIELH-------RHLP---------------------SC 192
Fly 193 PYRRQ--------------QEPQEEKCPFAKIKCDFVGRPETNQLEEHLKADMPHHMQLMLQA-- 241
Fly 242 ----------FQQTAIATWQPHKPSTSGAAVENGHGQQQLPPPPQYANGVDEQI----------- 285
Fly 286 --VQTMYQRIVVLE---QRTRE------------------QETRLENMQKQLRLARQQ------- 320
Fly 321 -------------------------------------------------APVDPRYS-------N 329
Fly 330 GTIVWRIEQLGALVARLRANANNQVYSHECYTSPHGYKFCARLNI----QPRKPHVLSLHVHLMQ 390
Fly 391 SENDYHLDWPFKGRIKLCMVHPADATLSQHDTIMTKPEILAFHKPREAISTRGFGFLEYAN---- 451
Fly 452 --ISNIIQLG-FCADDRLLIKIEIN 473 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Traf6 | NP_511080.2 | RING | 103..141 | CDD:238093 | 15/37 (41%) |
Sina | 163..>230 | CDD:302762 | 17/110 (15%) | ||
MATH_TRAF6 | 330..473 | CDD:239745 | 38/153 (25%) | ||
Traf3 | XP_038968511.1 | RING-HC_TRAF3 | 93..134 | CDD:319554 | 16/40 (40%) |
zf-TRAF | 178..234 | CDD:280357 | 7/55 (13%) | ||
zf-TRAF | 239..289 | CDD:424248 | 10/58 (17%) | ||
Smc | <294..>475 | CDD:224117 | 22/186 (12%) | ||
MATH_TRAF3 | 420..605 | CDD:239746 | 42/193 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D391991at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |