Protein Alignment Traf6 and Traf4

DIOPT Version :9

• Sequence 1: NP_511080.2
• Gene: Traf6 / 31746
• FlyBaseID: FBgn0265464
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: NP_477416.1
• Gene: Traf4 / 33638
• FlyBaseID: FBgn0026319
• Length: 486
• Species: Drosophila melanogaster
• Alignment Length: 414
• Identity: 90/414 - (21%)
• Similarity: 140/414 - (33%)
• Gaps: 130/414 - (31%)

  Fly    87 SDTSGEQEEELLDSRYECAICIDWLNEPVL--TSCGHRFCRSCLTAWMQKNNQC------CPMDN 143
            |:.||...||...|   |.      .|||.  ..||.|..|..:|  :.|:..|      |....
  Fly   169 SEFSGAGLEEHNGS---CG------QEPVYCEAKCGQRILRGRMT--LHKSKDCAKRLRRCAHCQ 222

  Fly   144 KRLSAEHDIFPDNYTRREIEQLKRDCPNSSLGC--SVVASPI---ELHRHLPSCPYRRQQEPQEE 203
            :..||  |..|.:..:         ||.:.|.|  ...|.||   ||..||     |.:.:....
  Fly   223 REFSA--DTLPLHAAQ---------CPRAPLACPQRCDAGPIPRGELEAHL-----RDECQSLAV 271

  Fly   204 KCPFAKIKCDFVGRPETNQLEEHLKADMPHHMQLMLQAFQQTAIATWQPHKPSTSGAAVENGHGQ 268
            .|.|.:..|.|.|  ....||.||:::...|:.||
  Fly   272 SCSFKEAGCRFKG--PRQMLEAHLESNAAAHLSLM------------------------------ 304

  Fly   269 QQLPPPPQYANGVDEQIVQTMYQRIVVLEQRTREQETRLENMQKQLRLARQQAPVDPRYSNGTIV 333
                                     |.|..|..:|...|::...:|.:         .|: ||::
  Fly   305 -------------------------VALSSRQGQQIQMLKSAVSKLSI---------NYT-GTLL 334

  Fly   334 WRIEQLGALVARLRANANNQVYSHECYTSPHGYKFCARLNIQPRKP----HVLSLHVHLMQSEND 394
            |:|....|.:|..|.....::.|...|||.:|||..|.:.:....|    || |:::.::..|.|
  Fly   335 WKITDWSAKMAEARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHV-SVYIKVLPGEYD 398

  Fly   395 YHLDWPFKGRIKLCMVHPADATLSQH----------DTIMTKPEILAFHKPREAISTRGFGFLEY 449
            ..|.|||.        |....||.:.          ::.:..|....|.:|.......||||..:
  Fly   399 ALLKWPFS--------HSITFTLFEQGAQSGQGGVAESFVPDPTWENFQRPSNEPDQLGFGFPRF 455

  Fly   450 ANISNIIQLGFCADDRLLIKIEIN 473
            .:...:....|...|.:.::::::
  Fly   456 ISHELLHSRPFIKGDTVFLRVKVD 479

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Traf6	NP_511080.2	RING	103..141	CDD:238093	12/45 (27%)
		Sina	163..>230	CDD:302762	21/71 (30%)
		MATH_TRAF6	330..473	CDD:239745	37/156 (24%)
Traf4	NP_477416.1	PLN03086	<109..206	CDD:178635	15/47 (32%)
		zf-TRAF	233..292	CDD:424248	19/74 (26%)
		MATH_TRAF4	331..479	CDD:239750	37/156 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45438617
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D391991at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10131
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.950