Protein Alignment Traf6 and Pdzrn4

DIOPT Version :9

• Sequence 1: NP_511080.2
• Gene: Traf6 / 31746
• FlyBaseID: FBgn0265464
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: NP_001158065.1
• Gene: Pdzrn4 / 239618
• MGIID: 3056996
• Length: 1014
• Species: Mus musculus
• Alignment Length: 259
• Identity: 59/259 - (22%)
• Similarity: 87/259 - (33%)
• Gaps: 70/259 - (27%)

  Fly    92 EQEEELLDSRYEC-AICIDWLNEPVLTSCGHRFCRSCLTAWMQKNNQCCPMDNKRLSAEHDIFPD 155
            |:..|.:|..::| .:|...|.||..|.|||.||.|||..| ....:.||:..:.| |..:::..
Mouse     6 ERLAEAVDPAFQCQLLCGQVLEEPACTPCGHVFCASCLLPW-AAGRRWCPLQCQPL-APGELYRV 68

  Fly   156 NYTRREIEQLKRDCPNSSLGCSVVASPIELHRHLPSCPYRRQQEPQEEKCP-----FAKIKCDFV 215
            ...|..::||:..|..|..||.        ||....| ::..........|     .|:...:..
Mouse    69 LPLRSLVQQLRVQCNYSGQGCG--------HRGDCGC-WQCTSSAAPSALPAAVTATAQAAAEAA 124

  Fly   216 GRPETNQ---------------------LEEHLKADMPHHMQL-MLQAFQQTAIATWQPHKPSTS 258
            ||..|.:                     |...:........|: :||...|..:|.:..|..:..
Mouse   125 GRKSTRRPRPAGVGTRVRGHPDLEVGLWLSPAVGVGKTRRAQVSLLQRRYQEKLALYMAHTRNFV 189

  Fly   259 GAAVENGHGQQQLPPPPQYANGVDEQIVQTMYQRIVVLEQRTREQET---------RLENMQKQ 313
            |.....|...:|.|                   ..||||   ||.:|         ..:|.|||
Mouse   190 GNPGGRGQDGEQKP-------------------FTVVLE---REDDTLGFNIIGGRPYQNSQKQ 231

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Traf6	NP_511080.2	RING	103..141	CDD:238093	16/38 (42%)
		Sina	163..>230	CDD:302762	15/92 (16%)
		MATH_TRAF6	330..473	CDD:239745
Pdzrn4	NP_001158065.1	RING	18..55	CDD:214546	16/37 (43%)
		PDZ	202..294	CDD:214570	12/52 (23%)
		PDZ_signaling	383..465	CDD:238492

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0297
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810