Protein Alignment Traf6 and trf-2

DIOPT Version :9

• Sequence 1: NP_511080.2
• Gene: Traf6 / 31746
• FlyBaseID: FBgn0265464
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: NP_491534.2
• Gene: trf-2 / 172151
• WormBaseID: WBGene00022454
• Length: 335
• Species: Caenorhabditis elegans
• Alignment Length: 333
• Identity: 70/333 - (21%)
• Similarity: 116/333 - (34%)
• Gaps: 111/333 - (33%)

  Fly   170 PNSSLGCSVVASPIELHRHLPSCPYRRQQEPQE-EKCPFAKIKCDFVGRPETNQLEEHLKADMPH 233
            |.:|.....|:.||.:....|:.|  :...|.. ..|||.:..|...|  |.::::.|::.|...
 Worm    52 PRTSTRSVGVSIPIHVEGEEPTAP--KSIVPDNWIDCPFKEHGCHKKG--ENSEVKRHVRDDRNL 112

  Fly   234 HMQLMLQA---------FQQTAIATWQPHKPSTSGAAVENGHGQQQLPPPPQYANGVDEQIVQTM 289
            |:.|:.|:         .||:|.                                 ||:.:....
 Worm   113 HLVLLCQSLNPIRTKINIQQSAY---------------------------------VDKYVGMLQ 144

  Fly   290 YQRIVVLEQRTREQETRLENMQKQLRLARQQAPVDPRYSNGTIVWRIEQLGALVARLRAN-ANNQ 353
            |..|.         |:..|....|                  ..:||.::|..|.:...| ::..
 Worm   145 YMSIA---------ESAFEKYGSQ------------------HTFRIPKIGLTVVKATKNKSHRS 182

  Fly   354 VYSHECYTSPHGYKFCARLNIQPRKPH--------VLSLHVHLMQSENDYHLDWPFKGRIKLCMV 410
            :||...|:..:|||..|     ...|:        ..|:.|.||:.|.|..|:|||:
 Worm   183 IYSQPFYSHGYGYKMMA-----VAAPYGDGLAFREYFSVFVCLMKGEWDDILEWPFR-------- 234

  Fly   411 HPADATLS----QHDTIMTK-------PEILAFHKPREAISTRGFGFLEYANISNIIQLGFCADD 464
              .|.|.|    ....::||       |||..|.:..|.:....|||..:..::.:.:  |.||.
 Worm   235 --CDVTFSILSDDKKELLTKTIYVNEMPEIQEFLERPEGLRNGTFGFQNFLPLAKVTE--FAADG 295

  Fly   465 RLLIKIEI 472
            .:.|:|::
 Worm   296 DIFIQIKV 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Traf6	NP_511080.2	RING	103..141	CDD:238093
		Sina	163..>230	CDD:302762	15/60 (25%)
		MATH_TRAF6	330..473	CDD:239745	41/163 (25%)
trf-2	NP_491534.2	MATH_TRAF_C	158..304	CDD:238168	42/181 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0297
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D391991at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	4	3.780