Protein Alignment Traf6 and traf1

DIOPT Version :9

• Sequence 1: NP_511080.2
• Gene: Traf6 / 31746
• FlyBaseID: FBgn0265464
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: XP_031747100.1
• Gene: traf1 / 101734662
• XenbaseID: XB-GENE-22069371
• Length: 549
• Species: Xenopus tropicalis
• Alignment Length: 502
• Identity: 109/502 - (21%)
• Similarity: 179/502 - (35%)
• Gaps: 177/502 - (35%)

  Fly    84 APGSDTSGEQEEELLDSRYECAICIDWLNEPVLTSCGHRFCRSCLTAWMQKNNQCCP-------- 140
            |||             .:|.|..|.:.|.:...|.||||:|..||...:.:|:..||
 Frog    33 APG-------------EKYLCCSCKNVLKKAQQTLCGHRYCTPCLVWIVSRNHDLCPKCKAEDPT 84

  Fly   141 -MDNKRLSAEHDIFPDNYTRREIEQLKRDC---------------PNSSL----------GCSVV 179
             :.:..|..|...|.|....:||.:||..|               .:.||          ||...
 Frog    85 TLSDDSLLKEERAFSDAAINKEISELKVHCVIPGCTWRGLMRDYEEHESLCNYALIPCHTGCGHR 149

  Fly   180 ASPIELHRHLPS--------CP-------------YRRQQEP----------------------Q 201
            ....:|..||.|        ||             :|.::.|                      :
 Frog   150 VMRKQLADHLESECPNNTIKCPKCTQHFSSNEFPKHRCEKGPTDDQSHRKTDQSAKGKNGNSHSK 214

  Fly   202 EEKCPFAKIKCDFVGRPETNQLEEHLKADMPHHMQL---MLQAFQQTAIAT-------WQPHKPS 256
            :|||.|..:.|.:||..|  :::||.:.....|:.|   ::...:.....|       :.|...|
 Frog   215 KEKCHFTPLGCTYVGSRE--KIKEHYRTSAAAHLSLVCPLILRIKDNLTNTEGKKNGFYVPLADS 277

  Fly   257 TSGAAVEN-----------GHGQQQL-------PPPPQYAN---------GVDEQIVQTMYQRI- 293
            |.|...:|           |:|..:|       .|..:.||         .|.|.|:..:.:.|
 Frog   278 TDGPGQKNPFSLQAEDFKAGNGDLELDCGHAVGQPSDEVANRLSLLETRLQVFENIISVLSKEID 342

  Fly   294 -------VVLEQRTREQ------ETRLENMQKQL--------RLARQQAPVDPRYSNGTIVWRIE 337
                   .:.||:..|:      |.::||::..|        .|..:.|.::....:|..:|:|.
 Frog   343 SSQSQLAAIKEQKAEEERKVKALEHKVENLRCTLAMKDIVLNELEMRSACLEQTSYDGVFLWKIS 407

  Fly   338 QL-----GALVARLRANANNQVYSHECYTSPHGYKFCARLNIQ----PRKPHVLSLHVHLMQSEN 393
            .|     .|:..|..:     :||...||:.:|||.|.|:.:.    .:..|| ||...:|:.|.
 Frog   408 DLTNKSHDAVTGRAIS-----LYSPAFYTAKYGYKVCLRIYLNGDGAGKGTHV-SLFFTVMKGEY 466

  Fly   394 DYHLDWPFKGRIKLCMV-HPADATLSQHDTIMT--KPEI--LAFHKP 435
            |..|.||||.::...:| |      :..|::..  :|::  .:|.:|
 Frog   467 DALLPWPFKHKVTFVLVDH------NNRDSVFDAFRPDVTSASFQRP 507

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Traf6	NP_511080.2	RING	103..141	CDD:238093	14/46 (30%)
		Sina	163..>230	CDD:302762	25/134 (19%)
		MATH_TRAF6	330..473	CDD:239745	33/120 (28%)
traf1	XP_031747100.1	RING_Ubox	38..79	CDD:418438	15/40 (38%)
		RAD18	39..>214	CDD:227719	35/174 (20%)
		TRAF_BIRC3_bd	317..377	CDD:406958	12/59 (20%)
		MATH	400..546	CDD:351761	33/120 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D391991at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010