Protein Alignment Traf6 and rnf41

DIOPT Version :9

• Sequence 1: NP_511080.2
• Gene: Traf6 / 31746
• FlyBaseID: FBgn0265464
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: XP_002934542.1
• Gene: rnf41 / 100489964
• XenbaseID: XB-GENE-943148
• Length: 317
• Species: Xenopus tropicalis
• Alignment Length: 294
• Identity: 69/294 - (23%)
• Similarity: 111/294 - (37%)
• Gaps: 71/294 - (24%)

  Fly    86 GSDTS---GEQEEELLDSRYECAICIDWLNEPV-LTSCGHRFCRSCLTAWMQKNNQCCPMDNKRL 146
            |.|.|   |:.:|:|:     |.||...|.||| ...|.|.||.:|:|.|..: .|.||:|...:
 Frog     2 GYDVSRFQGDVDEDLI-----CPICSGVLEEPVQAPHCEHAFCNACITQWFSQ-QQTCPVDRSVV 60

  Fly   147 SAEHDIFPDNYTRREIEQLKRDCPNSSLGCSVVASPIELHRHLPSCPYRRQQEPQEEKCPFAKIK 211
            :..|........|..:.:|:..|.|:..||:.:.....|..||..|          |..|...:.
 Frog    61 TVAHLRPVPRIMRNMLSKLQITCDNAVFGCTTIVRLDNLMSHLSDC----------EHNPKRPVT 115

  Fly   212 CDFVGRPETNQLEEHLKADMPHH--MQLMLQAFQQTAIATWQPHKPSTSGAAVENGHGQQQLPPP 274
            |      |.....|..|.::|:|  ::.:....||..|...:..|     ||.|:.|   ||...
 Frog   116 C------EQGCGLEMPKDELPNHNCIKHLRSVVQQQQIRIGELEK-----AAAESKH---QLSEQ 166

  Fly   275 PQYANGVDEQIVQTMYQRIVVLEQRTREQETRLENMQKQLRLARQQAPVDPRYSNGTIVW----- 334
            .:     |.|:::. |.|.:      |.....|:|:::.:..            |..:.|
 Frog   167 KR-----DIQLLKA-YMRAI------RSANPNLQNLEETIEY------------NEILEWVNSLQ 207

  Fly   335 --RIEQLGALV----ARLRANANNQVYSHECYTS 362
              |:.:.|.::    |.|:|.....:....|..|
 Frog   208 PARVTRWGGMISTPDAVLQAVIKRSLVESGCPAS 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Traf6	NP_511080.2	RING	103..141	CDD:238093	16/38 (42%)
		Sina	163..>230	CDD:302762	15/66 (23%)
		MATH_TRAF6	330..473	CDD:239745	8/44 (18%)
rnf41	XP_002934542.1	mRING-HC-C3HC3D_Nrdp1	15..57	CDD:319548	18/47 (38%)
		modified RING-HC finger (C3HC3D-type)	18..56	CDD:319548	17/38 (45%)
		USP8_interact	137..315	CDD:370198	26/137 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D918518at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920