Protein Alignment Traf6 and lnx1

DIOPT Version :9

• Sequence 1: NP_511080.2
• Gene: Traf6 / 31746
• FlyBaseID: FBgn0265464
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: XP_017950997.2
• Gene: lnx1 / 100487348
• XenbaseID: XB-GENE-952178
• Length: 742
• Species: Xenopus tropicalis
• Alignment Length: 348
• Identity: 71/348 - (20%)
• Similarity: 118/348 - (33%)
• Gaps: 120/348 - (34%)

  Fly    72 PKSLAL--------NQNHHYAPGSDTSGEQEEELLDSRYECAICIDWLNEPVLTSCGHRFCRSCL 128
            |:||..        .:||.|.    .:.|.:::||     |.||:..|.:|:.|.|||.:|..||
 Frog    15 PQSLCTVCGQLHSEEENHSYT----YTEEVDDDLL-----CNICLHALIQPLDTPCGHTYCTLCL 70

  Fly   129 TAWMQKNNQCCPMDNKRLSAEHDIFPDNYTRREIEQLKRDCPNSSLGCSVVASPIELHRHLP-SC 192
            |::: .:...||:|.|.:                  |.:.|..|::   :|.:.::   .|| .|
 Frog    71 TSFL-VHEDFCPVDRKHI------------------LLQTCKKSTI---LVKNLLD---KLPVIC 110

  Fly   193 PYRRQQEPQEEKCPFAKIKCDFVGRPETNQLEEHLK-----------------------ADMPHH 234
            |::       |.|.....:||         ||||.:                       ||....
 Frog   111 PFK-------EHCTDIVQRCD---------LEEHFQNRCKGASHYGLTKERKRRSQDSSADCSSS 159

  Fly   235 MQLMLQAFQQTAIATWQPHKPSTSGAAV---ENGHGQQQLPPPPQYANGVDEQIVQTMYQRIVVL 296
            :.|        .:|...|...:::..|:   |.|.......|    |.|......:.
 Frog   160 LDL--------TVAAVSPELSASAAIALATEETGQDNPAFSP----AKGESHTACEA-------- 204

  Fly   297 EQRTREQETRLENMQKQLRLARQQAPVDPRYSNGTIVWRIEQLGALVA----RLRANANN----- 352
            |:..|....|..|.::....:.....::..:|    |.|..:.|:.|.    |.|||..|
 Frog   205 EENCRLNRNRNRNFERSTVRSLSFKKLNRAFS----VLRRTKSGSSVVHASDRERANLQNANIVE 265

  Fly   353 --QVYSHECYTSPHGYKFCARLN 373
              .....:.:..|.|...|.::|
 Frog   266 DPMGLPRQYHLIPDGEITCIKIN 288

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Traf6	NP_511080.2	RING	103..141	CDD:238093	14/37 (38%)
		Sina	163..>230	CDD:302762	16/90 (18%)
		MATH_TRAF6	330..473	CDD:239745	13/55 (24%)
lnx1	XP_017950997.2	mRING-HC-C3HC3D_LNX1	43..84	CDD:319693	17/46 (37%)
		PDZ_signaling	282..366	CDD:238492	2/7 (29%)
		PDZ_signaling	390..470	CDD:238492
		PDZ_signaling	516..>585	CDD:238492
		PDZ_signaling	651..735	CDD:238492

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910