DRSC/TRiP Functional Genomics Resources

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Protein Alignment Traf6 and ftr35

DIOPT Version :10

Sequence 1:NP_511080.2 Gene:Traf6 / 31746 FlyBaseID:FBgn0265464 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_005163671.1 Gene:ftr35 / 100005754 ZFINID:ZDB-GENE-070912-111 Length:558 Species:Danio rerio


Alignment Length:440 Identity:85/440 - (19%)
Similarity:152/440 - (34%) Gaps:146/440 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 LDSRYECAICIDWLNEPVLTSCGHRFCRSCLT-AWMQKNNQ---CCPMDNKRLSAEHDIFPDNYT 158
            |...:.|::|:|.|.:||...|||.:|.||:| .|.|::.:   .||...:..|....:..:...
Zfish     8 LAHHFSCSVCLDLLKDPVSIPCGHNYCMSCITDCWNQEDQKRVYSCPQCRQTFSPRPALAKNTML 72

  Fly   159 RREIEQLKRD-----------CPNSSLGCSVVASPIELHRHLPSC----------PYRRQQEPQE 202
            ...:|:|::.           ..:..:.|.|...  ..:|.:.||          .::|.||.. 
Zfish    73 AEVLEKLQKSKLQAAGPAQSPAASGDVECDVCTG--AKNRAVKSCLVCLNSYCHTHFQRHQEIH- 134

  Fly   203 EKCPFAKIKCDFVGRPETNQLEEHLKADMPHHMQLMLQAFQQT------AIATWQPHK-PSTSGA 260
               |..:.|.    ...|::|:|.:   .|.| :..|:.|.:|      .:.....|| ..|..|
Zfish   135 ---PGNRHKV----TEATHKLQEMI---CPQH-EKPLEIFCRTDHCCICYLCLLDQHKHHDTVSA 188

  Fly   261 AVENGHGQQQLPPPPQYANGVDEQIVQTMYQRIVVLEQRTREQETRLENMQKQLRLARQ--QAPV 323
            |.|....:.:|            :..|:.:|      ||.:|::..||.:::.:...::  ||.|
Zfish   189 AAERTEQESRL------------RETQSRFQ------QRLQERQKELEELREAVESHKRSAQAAV 235

  Fly   324 D--PRYSNGTIVW-------------------------RIEQLGALVARL-RANANNQVYSHECY 360
            |  .|.....|.|                         |:|:|...:..| |.||..:..||   
Zfish   236 DHTERIFTQLICWIERSRSELTQMIRDGEKTAVSGAEERLERLEQEINDLRRRNAELEQLSH--- 297

  Fly   361 TSPHGYKFCARLNIQPRKPHVLSLHVHLMQSENDYHLDWPFKGRIKLCMVHPADATLSQHDTIMT 425
                                 ...|:|.:||             ::...|.|.    |...:...
Zfish   298 ---------------------TEDHIHFLQS-------------LQSLSVPPG----STDSSSFI 324

  Fly   426 KPEILAFHKPREAISTRGFGFLEYANISNIIQLGFCADDRLLIKIEINIV 475
            ....|||.:..|::|          .:.:.:| .||.::..:|...::.:
Zfish   325 SSSQLAFDQLAESVS----------RLRDKLQ-QFCTEEIEMISSRVSSI 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Traf6NP_511080.2 mRING-HC-C3HC3D_LNX1-like 101..143 CDD:438299 17/45 (38%)
Sina 169..>230 CDD:460824 13/70 (19%)
MATH_TRAF6 330..473 CDD:239745 27/168 (16%)
ftr35XP_005163671.1 RING_Ubox 7..78 CDD:473075 19/69 (28%)
Bbox_SF 99..143 CDD:469587 10/53 (19%)
Bbox2_TRIM16-like 151..196 CDD:380827 11/48 (23%)
DUF5401 <176..>265 CDD:375164 21/106 (20%)
SPRY_PRY_SNTX 374..554 CDD:294002
Blue background indicates that the domain is not in the aligned region.

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