DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Traf6 and rnf151

DIOPT Version :10

Sequence 1:NP_511080.2 Gene:Traf6 / 31746 FlyBaseID:FBgn0265464 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_021328191.1 Gene:rnf151 / 100004674 ZFINID:ZDB-GENE-121214-234 Length:243 Species:Danio rerio


Alignment Length:259 Identity:53/259 - (20%)
Similarity:93/259 - (35%) Gaps:51/259 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 TSGEQEEELLDSRYE---CAICIDWLNEPVLTSCGHRFCRSCLTAWMQKNNQ--CC--PMDNKRL 146
            |.|.:.::.:|...:   |.||...|..||...|.|.||:.|:..||::..:  ||  .:|..::
Zfish     2 TGGYEVDQFVDPPDDDLICVICRAVLRCPVRLKCNHVFCKECILQWMKRQVKCPCCRQSIDQNQM 66

  Fly   147 SAEHDIFPDNYTRREIEQLKRDCPNSSLGCSVVASPIELHRHLPSCPYRRQQEPQEEKCPFAKIK 211
            .....:      .:.|.:|...|.|...||.........:.|:.:|||..|..|.|        .
Zfish    67 LVLFKL------SKSIGRLSVKCRNGQQGCRATFPLSNEYLHISTCPYEWQICPHE--------G 117

  Fly   212 CDFVGRPETNQLEEHLKADMPHHMQLMLQAFQQTAIATWQPHKPSTSGA-AVENGHGQQQLPPPP 275
            |.          ::.|:.|:..|.|         :...|:...|...|. .|.....|...    
Zfish   118 CG----------QQVLRKDVQAHDQ---------SCTHWRQLCPMGCGTLLVRENQTQHNC---- 159

  Fly   276 QYANGVDEQIVQTMYQRIVV--LEQRTREQETRLENMQKQLRLARQQAPV---DPRYSNGTIVW 334
             |.......:.:...||.:.  |.::.:..::|:..:::|:.|..:...|   :.....||..|
Zfish   160 -YRELQQRYLAERRKQRAIAANLRRKMQRMQSRMAQIKRQINLMCESLEVGDLETEAGEGTSAW 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Traf6NP_511080.2 mRING-HC-C3HC3D_LNX1-like 101..143 CDD:438299 15/48 (31%)
Sina 169..>230 CDD:460824 13/60 (22%)
MATH_TRAF6 330..473 CDD:239745 3/5 (60%)
rnf151XP_021328191.1 RING_Ubox 15..63 CDD:473075 15/47 (32%)
zf-TRAF 102..157 CDD:280357 16/81 (20%)

Return to query results.
Submit another query.