DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and ZF1

DIOPT Version :9

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_201546.1 Gene:ZF1 / 836881 AraportID:AT5G67450 Length:245 Species:Arabidopsis thaliana


Alignment Length:92 Identity:25/92 - (27%)
Similarity:43/92 - (46%) Gaps:11/92 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   331 RPAKCEVCGKAFYSFHDLNVHAVSH-----TNLRPFVCDVCGSTFQRKKALRVHKLLH-----SE 385
            |..||.||||:|.|:..|..|..||     |::.....::..::.....::.::..::     |:
plant    95 RDYKCTVCGKSFSSYQALGGHKTSHRKPTNTSITSGNQELSNNSHSNSGSVVINVTVNTGNGVSQ 159

  Fly   386 QRK-YACKLCGKTFAQSGGLNAHMRSH 411
            ..| :.|.:|.|:||....|..|.|.|
plant   160 SGKIHTCSICFKSFASGQALGGHKRCH 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 C2H2 Zn finger 224..246 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
COG5048 <256..415 CDD:227381 25/92 (27%)
zf-H2C2_2 263..288 CDD:290200
C2H2 Zn finger 279..327 CDD:275368
zf-H2C2_2 320..342 CDD:290200 7/10 (70%)
C2H2 Zn finger 335..355 CDD:275368 9/19 (47%)
C2H2 Zn finger 363..383 CDD:275368 0/19 (0%)
zf-C2H2 389..411 CDD:278523 8/21 (38%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
ZF1NP_201546.1 zf-C2H2_6 97..122 CDD:404748 12/24 (50%)
zf-C2H2_6 163..188 CDD:404748 9/24 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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