DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and AT3G49930

DIOPT Version :9

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_190562.1 Gene:AT3G49930 / 824155 AraportID:AT3G49930 Length:215 Species:Arabidopsis thaliana


Alignment Length:224 Identity:50/224 - (22%)
Similarity:74/224 - (33%) Gaps:68/224 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 SLDKSASERNSKKRKGPPKVYKC-------NEEACNQTFRTERDLRGHRWKHTGIFCDICGKPFT 259
            :||...|..::.....||...:|       |.|:..:..||:|    ||       .|....|.:
plant     2 ALDTLNSPTSTTTTTAPPPFLRCLDETEPENLESWTKRKRTKR----HR-------IDQPNPPPS 55

  Fly   260 QSGN-----MMRHRQRHSGIKPHKCPECDATFYTQKELSSHSICHTGRMPCICEVCGRPCRDRGV 319
            :...     :|..|    |...|..|..|  .::...||.|                        
plant    56 EEEYLALCLLMLAR----GSSDHHSPPSD--HHSLSPLSDH------------------------ 90

  Fly   320 LTAHMRRHTGERPAKCEVCGKAFYSFHDLNVHAVSHTNLRPFVCDVCGS--TFQRKKALRVHKLL 382
                      ::..||.||||:|.|:..|..|..||.  :|...||..|  |......:. :.|:
plant    91 ----------QKDYKCSVCGKSFPSYQALGGHKTSHR--KPVSVDVNNSNGTVTNNGNIS-NGLV 142

  Fly   383 HSEQRKYACKLCGKTFAQSGGLNAHMRSH 411
            ....:.:.|.:|.|:|.....|..|.|.|
plant   143 GQSGKTHNCSICFKSFPSGQALGGHKRCH 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 C2H2 Zn finger 224..246 CDD:275368 8/28 (29%)
C2H2 Zn finger 251..271 CDD:275368 4/24 (17%)
COG5048 <256..415 CDD:227381 36/163 (22%)
zf-H2C2_2 263..288 CDD:290200 6/29 (21%)
C2H2 Zn finger 279..327 CDD:275368 5/47 (11%)
zf-H2C2_2 320..342 CDD:290200 6/21 (29%)
C2H2 Zn finger 335..355 CDD:275368 9/19 (47%)
C2H2 Zn finger 363..383 CDD:275368 5/21 (24%)
zf-C2H2 389..411 CDD:278523 7/21 (33%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
AT3G49930NP_190562.1 zf-C2H2_6 94..119 CDD:290623 12/26 (46%)
zf-C2H2_6 148..172 CDD:290623 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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