DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and AT3G46080

DIOPT Version :9

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_190194.1 Gene:AT3G46080 / 823751 AraportID:AT3G46080 Length:164 Species:Arabidopsis thaliana


Alignment Length:154 Identity:42/154 - (27%)
Similarity:55/154 - (35%) Gaps:46/154 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 ERPAKCEVCGKAFYSFHDLNVHAVSHTNL----RPFVCDVCGSTFQRK-KALRVHKLLHSEQRKY 389
            :|..:|:.|.|.|.||..|..|..||..|    .|   .:.||...:| |....|          
plant    34 KRVFRCKTCLKEFSSFQALGGHRASHKKLINSSDP---SLLGSLSNKKTKTATSH---------- 85

  Fly   390 ACKLCGKTFAQSGGLNAHMRSHDPARVKGAVKPLPQSVTIEVIEGKSPPTTTIT----------- 443
            .|.:||..|.....|..|||.|      .:.|..|.::   |.....|.|||:|           
plant    86 PCPICGVEFPMGQALGGHMRRH------RSEKASPGTL---VTRSFLPETTTVTTLKKSSSGKRV 141

  Fly   444 MAIDLNVEEQLVKQTETAPTTWRL 467
            ..:||:..|.||        .|:|
plant   142 ACLDLDSMESLV--------NWKL 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 C2H2 Zn finger 224..246 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
COG5048 <256..415 CDD:227381 27/89 (30%)
zf-H2C2_2 263..288 CDD:290200
C2H2 Zn finger 279..327 CDD:275368
zf-H2C2_2 320..342 CDD:290200 4/11 (36%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 5/20 (25%)
zf-C2H2 389..411 CDD:278523 8/21 (38%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
AT3G46080NP_190194.1 zf-C2H2_6 36..61 CDD:372808 10/24 (42%)
zf-C2H2_6 85..110 CDD:372808 10/40 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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