DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and AT3G29340

DIOPT Version :9

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_189580.1 Gene:AT3G29340 / 822592 AraportID:AT3G29340 Length:650 Species:Arabidopsis thaliana


Alignment Length:440 Identity:91/440 - (20%)
Similarity:136/440 - (30%) Gaps:158/440 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 GGEQSEHNETHEE-EEGESDDDDTKDSN-----DTKDMLFQCDQCDRAYNTKRSLQSH------- 190
            ||.|..|....|: .:.|..:...:.|.     ::....::|..|.:.:...|.|..|       
plant    59 GGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRST 123

  Fly   191 -RRLKHSEANGGSLDKSASERNSKKRKGPPKVYKCNEE---------------------ACNQTF 233
             |.|..::.....||.|    .:||....|..:|.::|                     |...|.
plant   124 KRELASTQDENSLLDSS----EAKKIVSQPSSFKVSQEEKFLHCVELKQDFSEPLSHSGALPSTL 184

  Fly   234 RTERDLRGHRWKHTGIFCDICGKPFTQSGNMMRHRQRH---SG------------------IKPH 277
            |::...: .:|| :...|.||||.|..|..:..|::.|   ||                  :|..
plant   185 RSKLQTK-TQWK-SSCHCKICGKSFVCSQGLGNHKRVHREISGKLACKRKYTEDYNPFSDSLKAK 247

  Fly   278 KCPECDATF-YTQKELSSHSI----------CHTG---RMPCI---------------------- 306
            |..:..::| .:|:|...|.:          .|:|   .:.|.                      
plant   248 KIVKKPSSFEVSQEEKILHCVELKQDFGELLAHSGFDKSISCSKSIKVKKVARKNEKTEDSTSLF 312

  Fly   307 -------------CEVCGRPCRDRGVLTAHMRRHTG-----------ER----PAKCEVCG-KAF 342
                         |:.|||.......:..|.|.|:|           ||    ..|..||. .||
plant   313 GVFVGEMSQRLHGCKTCGRKFGTLKGVYGHQRMHSGNHNRIEDENGLERIWGLKKKSRVCSVSAF 377

  Fly   343 YSF-----------HDLNVHAVSHTNLRPFVCDVC-------GSTF---QRKKALRVHKLLHSEQ 386
            ..|           |::...|::...|...|.|..       |..|   :.|......||....:
plant   378 DRFKGSSFMAEIEKHEVIEAALNLVMLCQGVYDFASISNLPLGDGFMDLELKPCPLRRKLQKKSR 442

  Fly   387 RKYACKLCGKTFAQSGGLNAHMRSHDPARVKGAVKPLPQSVTIEVIEGKS 436
            ..|.|.:|.|:|..|..|.:|.|.|   |.|...||       |.||..|
plant   443 SSYKCSICEKSFVCSQALGSHQRLH---RWKLVPKP-------EYIEDDS 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 C2H2 Zn finger 224..246 CDD:275368 5/42 (12%)
C2H2 Zn finger 251..271 CDD:275368 8/19 (42%)
COG5048 <256..415 CDD:227381 52/265 (20%)
zf-H2C2_2 263..288 CDD:290200 7/46 (15%)
C2H2 Zn finger 279..327 CDD:275368 13/96 (14%)
zf-H2C2_2 320..342 CDD:290200 9/37 (24%)
C2H2 Zn finger 335..355 CDD:275368 7/31 (23%)
C2H2 Zn finger 363..383 CDD:275368 6/29 (21%)
zf-C2H2 389..411 CDD:278523 9/21 (43%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
AT3G29340NP_189580.1 zf-C2H2_6 43..68 CDD:290623 4/8 (50%)
C2H2 Zn finger 45..65 CDD:275368 3/5 (60%)
C2H2 Zn finger 100..120 CDD:275368 5/19 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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