DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and AT2G28710

DIOPT Version :9

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_180439.1 Gene:AT2G28710 / 817420 AraportID:AT2G28710 Length:156 Species:Arabidopsis thaliana


Alignment Length:145 Identity:40/145 - (27%)
Similarity:51/145 - (35%) Gaps:45/145 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 AHMRRHTGERPAKCEVCGKAFYSFHDLNVHAVSHTNLRPFVCDVCGSTFQRKKALRVHKLLHSEQ 386
            || :..|..|...|:.|.|.|.||..|..|..||               :|..||..| ...|.:
plant    24 AH-QNDTKSRVFACKTCNKEFPSFQALGGHRASH---------------RRSAALEGH-APPSPK 71

  Fly   387 R----KYACKLCGKTFAQSGGLNAHMRSHDPARVKGAVKPLPQSVTIEVIEGKSPPTTTITM--- 444
            |    |:.|.:||..||....|..|||.|......|..:.|            :|.|..:||   
plant    72 RVKPVKHECPICGAEFAVGQALGGHMRKHRGGSGGGGGRSL------------APATAPVTMKKS 124

  Fly   445 ---------AIDLNV 450
                     .:|||:
plant   125 GGGNGKRVLCLDLNL 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 C2H2 Zn finger 224..246 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
COG5048 <256..415 CDD:227381 31/96 (32%)
zf-H2C2_2 263..288 CDD:290200
C2H2 Zn finger 279..327 CDD:275368 2/4 (50%)
zf-H2C2_2 320..342 CDD:290200 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 4/19 (21%)
zf-C2H2 389..411 CDD:278523 9/21 (43%)
C2H2 Zn finger 391..411 CDD:275368 9/19 (47%)
AT2G28710NP_180439.1 zf-C2H2_6 33..59 CDD:404748 10/40 (25%)
zf-C2H2_6 78..100 CDD:404748 9/21 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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