DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18262 and zgc:113030

DIOPT Version :10

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001018545.1 Gene:zgc:113030 / 553738 ZFINID:ZDB-GENE-050522-528 Length:240 Species:Danio rerio


Alignment Length:241 Identity:80/241 - (33%)
Similarity:110/241 - (45%) Gaps:27/241 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 CDQCDRAYNTKRSLQSHRRLKHSEANGGSLDKSASERNSKKRKGPPKVYKCNEEACNQTFRTERD 238
            |.||.::::...:|..|..:...|                      |.:.|.:  |.::|.....
Zfish    20 CTQCGKSFSQSSNLNRHMMIHTGE----------------------KPFTCTQ--CGKSFTQSSS 60

  Fly   239 LRGHRWKHTG---IFCDICGKPFTQSGNMMRHRQRHSGIKPHKCPECDATFYTQKELSSHSICHT 300
            |..|...|||   ..|..|||.||:|.|::.|...|:|.||..|.:|...|.....|:.|.:.||
Zfish    61 LNKHMMIHTGERPFICTQCGKSFTRSSNLIEHMLIHTGEKPFTCTQCGRNFRQAAHLNQHIVIHT 125

  Fly   301 GRMPCICEVCGRPCRDRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVHAVSHTNLRPFVCDV 365
            |..|..|:.||:....|..|..|:|.||.|||..|.||||:......|..|...||.:|..||..
Zfish   126 GEKPHRCDQCGQTFARRSFLKFHLRVHTNERPYSCSVCGKSCTRQSSLIKHQKIHTGVREHVCFE 190

  Fly   366 CGSTFQRKKALRVHKLLHSEQRKYACKLCGKTFAQSGGLNAHMRSH 411
            |..||.....|:.|:.:|:.::.|.|..|.|.|:|||.|.||.|:|
Zfish   191 CEKTFVTADDLKRHQRIHTGEKPYMCSHCDKRFSQSGSLKAHERTH 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 33/93 (35%)
C2H2 Zn finger 224..246 CDD:275368 5/21 (24%)
C2H2 Zn finger 251..271 CDD:275368 9/19 (47%)
zf-H2C2_2 263..288 CDD:463886 9/24 (38%)
C2H2 Zn finger 279..327 CDD:275368 16/47 (34%)
zf-H2C2_2 320..342 CDD:463886 13/21 (62%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
zf-C2H2 389..411 CDD:395048 12/21 (57%)
C2H2 Zn finger 391..411 CDD:275368 11/19 (58%)
zgc:113030NP_001018545.1 C2H2 Zn finger 20..40 CDD:275368 5/19 (26%)
COG5048 <25..204 CDD:227381 62/202 (31%)
C2H2 Zn finger 48..68 CDD:275368 5/21 (24%)
C2H2 Zn finger 76..96 CDD:275368 9/19 (47%)
C2H2 Zn finger 104..124 CDD:275368 5/19 (26%)
C2H2 Zn finger 132..152 CDD:275368 7/19 (37%)
C2H2 Zn finger 160..180 CDD:275368 7/19 (37%)
C2H2 Zn finger 188..208 CDD:275368 6/19 (32%)
zf-H2C2_2 200..225 CDD:463886 8/24 (33%)
C2H2 Zn finger 216..236 CDD:275368 11/19 (58%)

Return to query results.
Submit another query.