DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and gl

DIOPT Version :10

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster


Alignment Length:187 Identity:61/187 - (32%)
Similarity:87/187 - (46%) Gaps:30/187 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 NEEACNQTFRTERDLRGHRWKHTGIFCDICGKPFTQSGNMMRHRQRHSGIKPHKCPECDATFYTQ 289
            :||..|:....:....|...|..  .|.:|||.:.:...:..|.:.|||.:|::||:|:.:|...
  Fly   415 DEEDSNEDLDGDEGSSGGEMKPN--LCRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQA 477

  Fly   290 KELSSHSICHTGRMPCICEVCGRPCRDRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVHAVS 354
            ..|::|...|||:.|..|.:|.|.......:|.|||.|:||||.:|..|.|:|.....|..|   
  Fly   478 ANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKH--- 539

  Fly   355 HTNLRPFVCDVCGSTFQRKKALRVHKLLHSEQRKYACKLCGKTFAQSGGLNAHMRSH 411
                                 ||:    ||.::.|.||||...|:|||.||.|||.|
  Fly   540 ---------------------LRI----HSGEKPYQCKLCLLRFSQSGNLNRHMRVH 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 26/87 (30%)
C2H2 Zn finger 224..246 CDD:275368 4/20 (20%)
C2H2 Zn finger 251..271 CDD:275368 5/19 (26%)
zf-H2C2_2 263..288 CDD:463886 9/24 (38%)
C2H2 Zn finger 279..327 CDD:275368 17/47 (36%)
zf-H2C2_2 320..342 CDD:463886 12/21 (57%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 2/19 (11%)
zf-C2H2 389..411 CDD:395048 14/21 (67%)
C2H2 Zn finger 391..411 CDD:275368 13/19 (68%)
glNP_001262708.1 COG5048 <426..571 CDD:227381 57/174 (33%)
C2H2 Zn finger 439..459 CDD:275368 5/19 (26%)
C2H2 Zn finger 467..487 CDD:275368 6/19 (32%)
C2H2 Zn finger 495..515 CDD:275368 7/19 (37%)
C2H2 Zn finger 523..543 CDD:275368 8/47 (17%)
C2H2 Zn finger 551..571 CDD:275368 13/19 (68%)

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