DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and CG17803

DIOPT Version :10

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster


Alignment Length:403 Identity:90/403 - (22%)
Similarity:150/403 - (37%) Gaps:95/403 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FSAPASYEVSCLLCDQRLPLDGYPEHFRLKHFTNSSSSLCSNELESDPIAQDVVEVQGNEELHEE 88
            ||:....:...:|.:...|||..|..|          ||..:||:.|...:....::.|:..:|.
  Fly   199 FSSELLPDSEGVLDEDDFPLDAEPTQF----------SLSEDELDLDRDTEKDFALEQNKSCNEI 253

  Fly    89 LAKEASPDLEEEEEEKEEGSKRQH----YQRAAAMKNTLVETREDLLDIELDWTGGEQSEHNETH 149
            ::....       :.|||..|..|    |:......|:|.||... ..:.|.    ::.:...:.
  Fly   254 ISIRKC-------KTKEEIGKVDHGAKVYKVVLGEYNSLKETAPK-YSLSLP----KKPQLRVSP 306

  Fly   150 EEEEGESDDDDTKDSNDTKDMLFQCDQCDRAYNTKRSLQSHRRLKHSEANGGSLDKSASERNSKK 214
            ||:...     .::....|.:.:.||:|...:..:..||.| .|:|:.|           :|.:.
  Fly   307 EEKNRR-----RRERIQAKPLNYVCDKCGHTFRQRSQLQMH-LLRHNRA-----------KNFEC 354

  Fly   215 RKGPPKVY-------------------KCNEEACNQTF-------RTERDLRGHRWKHTGIFCDI 253
            .:.|.|.|                   .||.  ||::|       |.|||:.|            
  Fly   355 PECPKKFYDLYTRNIHVRALHKGEHPFPCNH--CNESFANASSRHRHERDVHG------------ 405

  Fly   254 CGKPFTQSGNMMRHR--QRHSGIKPHKCPECDATFYTQKELSSHSICHTGRMPCICEVCGRPCRD 316
                   :||.:|.|  .:..|...|.|.:|..::.::|.|..|...|.|..|..|::|.....|
  Fly   406 -------AGNRIRTRVKSKEEGSSRHYCTQCTKSYTSKKGLVLHMNFHNGSRPFQCKICQMKFAD 463

  Fly   317 RGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVHAVSHTNLRPFVCDVCGSTFQRKKALRVHKL 381
            ...:..|...| .:.|.:|::|.|.|.....|..|...||.:.|..|::|...::.:..|..||.
  Fly   464 PSAMKRHQALH-DKFPIRCDICLKGFLLRSQLTKHQDVHTGMHPHRCEICDVHYRHRYNLNKHKN 527

  Fly   382 --LHSEQRKYACK 392
              ||.:..:.|.|
  Fly   528 TDLHRDNMQKAIK 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 27/118 (23%)
C2H2 Zn finger 224..246 CDD:275368 10/28 (36%)
C2H2 Zn finger 251..271 CDD:275368 4/21 (19%)
zf-H2C2_2 263..288 CDD:463886 7/26 (27%)
C2H2 Zn finger 279..327 CDD:275368 12/47 (26%)
zf-H2C2_2 320..342 CDD:463886 6/21 (29%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 5/21 (24%)
zf-C2H2 389..411 CDD:395048 2/4 (50%)
C2H2 Zn finger 391..411 CDD:275368 1/2 (50%)
CG17803NP_650657.2 zf-AD 86..160 CDD:214871
SUF4-like 320..>376 CDD:411020 14/67 (21%)
C2H2 Zn finger 323..351 CDD:411020 9/39 (23%)
C2H2 Zn finger 326..346 CDD:275368 7/20 (35%)
C2H2 Zn finger 354..375 CDD:411020 3/20 (15%)
C2H2 Zn finger 354..375 CDD:275368 3/20 (15%)
C2H2 Zn finger 383..401 CDD:275368 6/19 (32%)
C2H2 Zn finger 426..446 CDD:275368 5/19 (26%)
C2H2 Zn finger 454..474 CDD:275368 4/19 (21%)
C2H2 Zn finger 481..501 CDD:275368 6/19 (32%)
C2H2 Zn finger 509..528 CDD:275368 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.

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