DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and su(Hw)

DIOPT Version :9

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster


Alignment Length:493 Identity:120/493 - (24%)
Similarity:173/493 - (35%) Gaps:160/493 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 LHEELAKEASPDLEEEEEEKEEGSKR---QHY-QRAAAMKNTLVET-------REDLLDIEL--- 135
            |:|:....|:....|..:.|...|||   :|| .:|...:||..:|       .:|.:|..|   
  Fly   103 LNEKKTPSATVTAVETTKIKTSPSKRKKMEHYVLQAVKSENTKADTTVTVVTEEDDTIDFILADD 167

  Fly   136 -DWTGGEQSEHN-----ETHEEEE-GESDDDDTKDSN---------------------------- 165
             :...|....:|     .|.::|: ||..|:|.:||:                            
  Fly   168 EEVVPGRIENNNGQEIVVTEDDEDLGEDGDEDGEDSSGKGNSSQTKIKEIVEHVCGKCYKTFRRV 232

  Fly   166 -------------------------------------DTKDMLF--------------QCDQCDR 179
                                                 :.||:.|              .|..|.:
  Fly   233 QSLKKHLEFCRYDSGYHLRKADMLKNLEKIEKDAVVMEKKDICFCCSESYDTFHLGHINCPDCPK 297

  Fly   180 AYNTKRSLQSHRRLKHSE----------ANGGSLDKSASERNSKKRKGPPKVYKC---------- 224
            ::.|:.|.:.|..:.|||          ||..|....|......|.:|.|  |.|          
  Fly   298 SFKTQTSYERHIFITHSEFSDFPCSICNANLRSEALLALHEEQHKSRGKP--YACKICGKDFTRS 360

  Fly   225 --------------NE------EACNQTFRTERDLRGHRWKHTG--------IFCDICGKPFTQS 261
                          ||      :.|::.|....:||.|..:|.|        ..|..|...|...
  Fly   361 YHLKRHQKYSSCSSNETDTMSCKVCDRVFYRLDNLRSHLKQHLGTQVVKKPEYMCHTCKNCFYSL 425

  Fly   262 GNMMRHRQRHSGIKPHKCPECDATFYTQKELSSHSICHTGRMPCICEVCGRPCRDRGVLTAHMRR 326
            ..:..|.:.|:|.||..|..||..|.....|..|...|||..|..|.||.:....:.||..||:|
  Fly   426 STLNIHIRTHTGEKPFDCDLCDKKFSALVALKKHRRYHTGEKPYSCTVCNQAFAVKEVLNRHMKR 490

  Fly   327 HTGERPAKCEVCGKAFYSFHDLNVHAVSHTNLRPFVCDVCGSTFQRKKALRVHKLLHSEQRK--Y 389
            ||||||.||:.|||:|.....|..|  |.|::|||.|:.|...|:.:|.|..|...||..::  :
  Fly   491 HTGERPHKCDECGKSFIQATQLRTH--SKTHIRPFPCEQCDEKFKTEKQLERHVKTHSRTKRPVF 553

  Fly   390 ACKLCGKTFAQSGGLNAHM--RSHDP----ARVKGAVK 421
            :|..|.:.|.....|..||  ..|.|    :.::.|||
  Fly   554 SCAECKRNFRTPALLKEHMDEGKHSPKQQRSSMRSAVK 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 C2H2 Zn finger 224..246 CDD:275368 8/51 (16%)
C2H2 Zn finger 251..271 CDD:275368 4/19 (21%)
COG5048 <256..415 CDD:227381 59/166 (36%)
zf-H2C2_2 263..288 CDD:290200 9/24 (38%)
C2H2 Zn finger 279..327 CDD:275368 17/47 (36%)
zf-H2C2_2 320..342 CDD:290200 15/21 (71%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
zf-C2H2 389..411 CDD:278523 6/23 (26%)
C2H2 Zn finger 391..411 CDD:275368 6/21 (29%)
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368 5/20 (25%)
COG5048 <312..517 CDD:227381 61/208 (29%)
C2H2 Zn finger 321..341 CDD:275368 4/19 (21%)
zf-C2H2 348..368 CDD:278523 2/19 (11%)
C2H2 Zn finger 350..368 CDD:275368 1/17 (6%)
C2H2 Zn finger 382..402 CDD:275368 5/19 (26%)
C2H2 Zn finger 415..435 CDD:275368 4/19 (21%)
zf-H2C2_2 428..451 CDD:290200 8/22 (36%)
C2H2 Zn finger 443..463 CDD:275368 6/19 (32%)
zf-H2C2_2 455..479 CDD:290200 9/23 (39%)
COG5048 <467..620 CDD:227381 47/127 (37%)
C2H2 Zn finger 471..491 CDD:275368 7/19 (37%)
zf-H2C2_2 484..508 CDD:290200 16/23 (70%)
C2H2 Zn finger 499..519 CDD:275368 8/21 (38%)
C2H2 Zn finger 525..545 CDD:275368 6/19 (32%)
C2H2 Zn finger 555..572 CDD:275368 4/16 (25%)
C2H2 Zn finger 598..615 CDD:275371
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446708
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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