DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and CG8319

DIOPT Version :9

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_649920.2 Gene:CG8319 / 41165 FlyBaseID:FBgn0037722 Length:383 Species:Drosophila melanogaster


Alignment Length:338 Identity:80/338 - (23%)
Similarity:130/338 - (38%) Gaps:79/338 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 LESDPIAQDVVEVQ----GNEELHEELAKEASPDLEEEEEEKEEGSKRQHYQRAAAMKNTLVETR 127
            ::.:|..:|.:.::    ||.|..::|.||.               |:.|...:...|:::..:|
  Fly    89 IKDEPNEEDFLFIENPDKGNLEAKKKLNKEI---------------KKTHQTASRTTKSSITTSR 138

  Fly   128 EDLLDIELDWTGGEQSEHNETHEEEEGESDDDDTKDSNDTKDMLFQCDQCDRAYNTKRSLQSHRR 192
                       .|.|                     ....|:..|:|:.|.:.:..:.:|..|.:
  Fly   139 -----------AGRQ---------------------LRSIKNQTFKCELCIKQFKRQINLLDHMK 171

  Fly   193 LKHSEAN-----------GGSLDKSASERNSKKRKGPPKVYKCNEEACNQTFRTERDLRGHRWK- 245
            : ||.::           ...||.....|||.      ...:|.|  |.:.|.:.:.|..|:.| 
  Fly   172 V-HSNSHVCQNCEERFLFKADLDNHQCYRNSN------STVECPE--CLKVFSSTQSLDSHKCKD 227

  Fly   246 ---HTGIFCDICGKPFTQSGNMMRHRQRHS----GIKPHKCPECDATFYTQKELSSHSICHTGRM 303
               .:...|..|.:.||:..|:..|...|:    |..||||..|...|:.:..|..|...|.|..
  Fly   228 MQERSPFQCPHCQQAFTREQNLKAHLLIHAESKQGNGPHKCSYCQTGFFNKSALKVHIHAHMGER 292

  Fly   304 PCICEVCGRPCRDRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVHAVSHTNLRPFVCDVCGS 368
            |..|..|....|.:..|..|:|.||||:|.:|..|.|.|...::|..|...|::.||:.|.:|..
  Fly   293 PHACPFCVSNFRSKQALKVHIRIHTGEKPYQCPHCPKTFSDNNNLAKHRRRHSDERPYKCSICLQ 357

  Fly   369 TFQRKKALRVHKL 381
            .|:.|..|:.|.|
  Fly   358 DFREKHHLKRHFL 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 C2H2 Zn finger 224..246 CDD:275368 7/25 (28%)
C2H2 Zn finger 251..271 CDD:275368 6/19 (32%)
COG5048 <256..415 CDD:227381 44/130 (34%)
zf-H2C2_2 263..288 CDD:290200 10/28 (36%)
C2H2 Zn finger 279..327 CDD:275368 14/47 (30%)
zf-H2C2_2 320..342 CDD:290200 11/21 (52%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
zf-C2H2 389..411 CDD:278523
C2H2 Zn finger 391..411 CDD:275368
CG8319NP_649920.2 zf-AD 4..79 CDD:285071
COG5048 <153..368 CDD:227381 62/223 (28%)
C2H2 Zn finger 153..173 CDD:275368 4/20 (20%)
C2H2 Zn finger 179..196 CDD:275368 2/16 (13%)
C2H2 Zn finger 207..227 CDD:275370 6/21 (29%)
C2H2 Zn finger 236..256 CDD:275368 6/19 (32%)
C2H2 Zn finger 268..288 CDD:275368 5/19 (26%)
C2H2 Zn finger 296..316 CDD:275368 6/19 (32%)
zf-H2C2_2 308..332 CDD:290200 11/23 (48%)
zf-C2H2 322..344 CDD:278523 6/21 (29%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
C2H2 Zn finger 352..368 CDD:275368 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449794
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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