DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and D19A

DIOPT Version :9

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_477304.1 Gene:D19A / 38718 FlyBaseID:FBgn0022935 Length:845 Species:Drosophila melanogaster


Alignment Length:514 Identity:116/514 - (22%)
Similarity:185/514 - (35%) Gaps:135/514 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LFSAPASYEVSCLLCDQRLPLDGYP----EHFRLKHFTNSSSSLCSNELE----SDPIAQDVVEV 79
            :|:..:|::|    .|..:.:..||    :|.......|....|..||.:    .:.:.::..||
  Fly    89 VFACQSSFDV----FDPNVAVQDYPAEEEDHVNYDPLLNHKMELIENEEDVFKMLEHVDKEAEEV 149

  Fly    80 QGNEELHEELAKEASPDLEEEEEEKEEGSKRQH-----------------YQRAAAMKNTLVETR 127
            :...::.|:.....|..:.:::...|.|:...|                 ..|..|..:...:.|
  Fly   150 EKEAKVEEDDGGNVSVKMFDDDSSIESGNDNDHDLDFEPNSSDDDIPLAQRMRGPATGSGPQQDR 214

  Fly   128 EDLLDIELDWTGGEQSEHNETHEEEE------GESDDDDTKDSNDTK------------------ 168
            ...||.......|...:......|||      .||||.:...|...|                  
  Fly   215 FSNLDKPKPRPRGRPKKIKPPPPEEEELSDSSSESDDSEDGTSRGDKPKRKRIPIEERHLHRIID 279

  Fly   169 ----------------------DML-FQC--DQCDRAYNTKRSLQSHRRLKHSEANGGSLDKSAS 208
                                  |:| |||  :.|.:.:.|...|:.|  :.|:......:....:
  Fly   280 CHICHQKFKKAIRYEEHMKYHNDLLPFQCKVETCKKGFTTANGLRIH--IDHAHTELSEVHACIA 342

  Fly   209 ERNSK-------------------KRKGPPKVYKCNEEACNQTFRTERDLRGHRWKHTG----IF 250
            |...|                   |...|.:.:.|.|  |:..||....|:.|.:||||    ..
  Fly   343 EGCGKTFPRVRLLTFHMKKVHGITKAAAPLRDFPCTE--CDTVFRCPTALKKHMYKHTGEELPYP 405

  Fly   251 CDICGKPFTQSGNMMRHRQRHSGIKPHKCPECDATFYTQKELSSHSICHTGRMPCICEVCGRPCR 315
            |:||||.|..:..:..|..||:|||.|.||.|.....|::|.::|                    
  Fly   406 CNICGKRFVINSALRDHLMRHAGIKNHVCPYCGVGKTTRQEWNAH-------------------- 450

  Fly   316 DRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVHA-VSHTNLRPFVCDVCGSTFQRKKALRVH 379
               :||     ||.|:..||..|..|.::...|:.|. |.|...:.|.|..||.||.:..|.:||
  Fly   451 ---ILT-----HTKEKKFKCRQCDHASHNKQALSNHVKVVHEKRKDFACQYCGKTFGKSHACKVH 507

  Fly   380 KLLHSEQRKYACKLCGKTFAQSGGLNAHMRSHDPARVKGAVKPLPQSVTIEVIEGKSPP 438
            :..|:.::...||:|||.|.....|..|:::|:...:..| :||.|.:.|.:....|.|
  Fly   508 ERSHTGEKCCECKICGKIFLCEKSLTKHLKTHEKRDLPPA-EPLRQQLNIPMPGQMSVP 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 C2H2 Zn finger 224..246 CDD:275368 7/21 (33%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
COG5048 <256..415 CDD:227381 47/159 (30%)
zf-H2C2_2 263..288 CDD:290200 10/24 (42%)
C2H2 Zn finger 279..327 CDD:275368 8/47 (17%)
zf-H2C2_2 320..342 CDD:290200 8/21 (38%)
C2H2 Zn finger 335..355 CDD:275368 6/20 (30%)
C2H2 Zn finger 363..383 CDD:275368 8/19 (42%)
zf-C2H2 389..411 CDD:278523 8/21 (38%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
D19ANP_477304.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 343..362 CDD:275368 2/18 (11%)
C2H2 Zn finger 377..397 CDD:275368 7/21 (33%)
zf-H2C2_2 389..414 CDD:290200 11/24 (46%)
C2H2 Zn finger 406..426 CDD:275368 7/19 (37%)
C2H2 Zn finger 434..454 CDD:275368 8/47 (17%)
C2H2 Zn finger 462..483 CDD:275368 6/20 (30%)
C2H2 Zn finger 491..511 CDD:275368 8/19 (42%)
C2H2 Zn finger 519..539 CDD:275368 8/19 (42%)
C2H2 Zn finger 652..673 CDD:275368
C2H2 Zn finger 681..701 CDD:275368
zf-H2C2_2 694..718 CDD:290200
C2H2 Zn finger 709..729 CDD:275368
tolA_full 724..>814 CDD:274303
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449747
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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