DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and CG10274

DIOPT Version :9

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001097525.1 Gene:CG10274 / 38716 FlyBaseID:FBgn0035690 Length:863 Species:Drosophila melanogaster


Alignment Length:545 Identity:128/545 - (23%)
Similarity:209/545 - (38%) Gaps:168/545 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LFSAPASYEVSCLLCDQRLPLDGYPEHFRLKHFTNSSSSLCSNELES----DPIAQDVVEVQGNE 83
            :|..|||.::               ::|.|.:...:...|...:.|.    ||:....:|:..||
  Fly    96 VFCPPASAQM---------------KNFDLLNVAGNEPELVGQDEEDRINFDPLLDHKMEMIENE 145

  Fly    84 E----LHEELAKEASPDLEEEEEEKEEGSKRQHYQRAAAM----KNTLVETREDL---LDIELDW 137
            |    :.|.:.|||      |:.|||  .|:.....|..|    ..:..|:.||:   :|.|.:.
  Fly   146 EDVFKMLEHVDKEA------EQVEKE--VKQDELDAADLMTIFAAESSEESEEDIDQDVDFEPNS 202

  Fly   138 TGG--------------------------EQSEHNETHEEEEGESDDDDTKDSNDTK-------- 168
            :.|                          |:.:...|..|||   |:|..|..:..|        
  Fly   203 SDGDDDVPLAQRLRDNSRMIPKAKAAVIKEEDQEFPTGSEEE---DEDGEKSKSRRKRIPPGERH 264

  Fly   169 ----------------------------DML-FQC--DQCDRAYNTKRSLQSHRRLKH---SEAN 199
                                        |:| |||  :.|.:.:.|...|:.|....|   ||.:
  Fly   265 LHRIIDCHICHQKFKKAIRYEEHMKHHNDLLPFQCKVETCRKGFTTAGGLRLHIDHAHTELSEVH 329

  Fly   200 GGSLDKSAS--------ERNSKKRKG------PPKVYKCNEEACNQTFRTERDLRGHRWKHTG-- 248
            ..::|....        ..:.||..|      ||:.|.|.|  |.:.||....|:.|.:||.|  
  Fly   330 SCNVDGCGKTFPRIRLLTFHMKKMHGITKAAAPPRDYPCTE--CEKVFRCPMALKKHMYKHDGKE 392

  Fly   249 --IFCDICGKPFTQSGNMMRHRQRHSGIKPHKCPECDATFYTQKELSSHSICHTGRMPCICEVCG 311
              ..|:||||.|..:..:..|..||:|||.:.||.|.....|::|.::|                
  Fly   393 LPFPCNICGKRFVINSALKDHLMRHAGIKNYVCPYCGVGKTTRQEWNTH---------------- 441

  Fly   312 RPCRDRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVH-AVSHTNLRPFVCDVCGSTFQRKKA 375
                   :||     ||.|:..||.:|..|.::...|..| .:.|..::.:.|..||.||.:..|
  Fly   442 -------ILT-----HTQEKKFKCHICEHASHNKQSLANHIKIVHEKIKNYACQYCGKTFGKSHA 494

  Fly   376 LRVHKLLHSEQRKYACKLCGKTFAQSGGLNAHMRSHDPARVKGAVKPLPQ-SVTIEVIEGK---- 435
            .::|::.|:.:::..||:|||.|.....|..|:::|: .||..|::...| .|.:....|:    
  Fly   495 CKIHEMTHTGEKRCECKVCGKKFLYPKSLTKHLKTHE-KRVLRAIETYRQRQVEMGETPGEQFDN 558

  Fly   436 --SPPTTTITM--AIDLNVEEQLVK 456
              :||...|::  .:..|..::|:|
  Fly   559 PPAPPVEGISIEPIMSRNAADELLK 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 C2H2 Zn finger 224..246 CDD:275368 7/21 (33%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
COG5048 <256..415 CDD:227381 43/159 (27%)
zf-H2C2_2 263..288 CDD:290200 9/24 (38%)
C2H2 Zn finger 279..327 CDD:275368 8/47 (17%)
zf-H2C2_2 320..342 CDD:290200 8/21 (38%)
C2H2 Zn finger 335..355 CDD:275368 5/20 (25%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
zf-C2H2 389..411 CDD:278523 8/21 (38%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
CG10274NP_001097525.1 zf-AD 15..90 CDD:214871
C2H2 Zn finger 334..353 CDD:275368 2/18 (11%)
C2H2 Zn finger 368..388 CDD:275368 7/21 (33%)
COG5048 394..729 CDD:227381 59/219 (27%)
C2H2 Zn finger 397..417 CDD:275368 7/19 (37%)
C2H2 Zn finger 425..445 CDD:275368 8/47 (17%)
C2H2 Zn finger 453..474 CDD:275368 5/20 (25%)
C2H2 Zn finger 482..502 CDD:275368 7/19 (37%)
C2H2 Zn finger 510..530 CDD:275368 8/19 (42%)
C2H2 Zn finger 638..659 CDD:275368
C2H2 Zn finger 667..687 CDD:275368
zf-H2C2_2 680..704 CDD:290200
C2H2 Zn finger 695..715 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449745
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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