DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18262 and Oaz

DIOPT Version :9

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001188929.1 Gene:Oaz / 36609 FlyBaseID:FBgn0284250 Length:1366 Species:Drosophila melanogaster


Alignment Length:344 Identity:82/344 - (23%)
Similarity:127/344 - (36%) Gaps:63/344 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 FQCDQCDRA-YNTKRSLQSHRRLKHSEANGGSL----------DKSASERNSKKRKGPPKVYKCN 225
            |.|..|:|. ..::..|.|||:|.|:...|.||          .::..|::.|........:|| 
  Fly   986 FSCGMCERQDLRSEAELHSHRKLAHNLKTGVSLRCAYCAGNFKSRAELEQHMKSCHNSTGKHKC- 1049

  Fly   226 EEACNQTFRTERDLRGHRWKHTGI----FCDICGKPFTQSGNMMRHRQRH---SGIKPHKCPECD 283
             ..|::.|.:...|..|:.:|:.:    .|..||:|.........|...|   ....|..|..|.
  Fly  1050 -LICDEVFPSPAILAEHKLQHSKVGQSGKCSHCGQPLEDVAAFRAHLSEHGSDGASLPLACICCR 1113

  Fly   284 ATFYTQKELSSHSICHT-------GRMPCICEVCGRPCRDRGVLTAHM-----RRH--TGER--- 331
            .|.:::.|||.|:..||       .....:|.:|..|..|.....|.:     |:|  .|:|   
  Fly  1114 QTLHSEFELSLHAKFHTKSSSSGGSLQEPVCALCLEPLPDATEGPAKLCDKCCRKHNLNGKRGKH 1178

  Fly   332 -------PA--------KCEVCGKAFYSFHDLNVHAVSH----TNLRPFVCDVCGSTFQRKKALR 377
                   ||        :|.:|.........|..|.|.|    |..|.|.|.:|.:.|.....|.
  Fly  1179 SEPATSLPAPPSAFVENRCNLCKMILPHAQKLQEHLVEHTFAGTEQRGFNCYICSAVFTAPGGLL 1243

  Fly   378 VHKLLH-SEQRKYACKLCGKTFAQSGGLNAHMRSHDPARVKGAVKPLPQSVTIEVIEGKSPPTTT 441
            .|...| :..|.|.|.||.:.|.....|..|.|.|:   ::...:|....|.:..|...||..:.
  Fly  1244 NHMGEHGAHSRPYDCNLCPEKFFFRAELEHHQRGHE---LRPQARPPAAKVEVPSIRNTSPGQSP 1305

  Fly   442 ITMAIDLNVEEQLVKQTET 460
            :...   .:.:|.:.:|:|
  Fly  1306 VRSP---TIVKQELYETDT 1321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 C2H2 Zn finger 224..246 CDD:275368 5/21 (24%)
C2H2 Zn finger 251..271 CDD:275368 5/19 (26%)
COG5048 <256..415 CDD:227381 49/198 (25%)
zf-H2C2_2 263..288 CDD:290200 6/27 (22%)
C2H2 Zn finger 279..327 CDD:275368 15/59 (25%)
zf-H2C2_2 320..342 CDD:290200 9/46 (20%)
C2H2 Zn finger 335..355 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..383 CDD:275368 5/19 (26%)
zf-C2H2 389..411 CDD:278523 8/21 (38%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
OazNP_001188929.1 C2H2 Zn finger 294..314 CDD:275368
C2H2 Zn finger 322..342 CDD:275368
zf-H2C2_2 334..359 CDD:290200
COG5048 336..769 CDD:227381
zf-C2H2 348..370 CDD:278523
C2H2 Zn finger 350..370 CDD:275368
C2H2 Zn finger 378..398 CDD:275368
C2H2 Zn finger 630..650 CDD:275368
C2H2 Zn finger 659..679 CDD:275368
C2H2 Zn finger 689..707 CDD:275368
C2H2 Zn finger 1020..1041 CDD:275368 2/20 (10%)
C2H2 Zn finger 1049..1069 CDD:275368 5/21 (24%)
C2H2 Zn finger 1197..1217 CDD:275368 5/19 (26%)
C2H2 Zn finger 1229..1246 CDD:275368 4/16 (25%)
C2H2 Zn finger 1258..1278 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449819
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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