DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and Zbtb48

DIOPT Version :10

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_038966377.1 Gene:Zbtb48 / 362668 RGDID:1311581 Length:739 Species:Rattus norvegicus


Alignment Length:425 Identity:103/425 - (24%)
Similarity:135/425 - (31%) Gaps:160/425 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 HNETHEEEEGESDDDDTKDSNDTKDMLFQCDQCDRAYNTKRSLQSHRRLKHSEANGGSLDKSASE 209
            ||..|                 |.:..|:|.:|.:.|..|.:|..|      ||           
  Rat   304 HNRKH-----------------TGEKPFECPKCGKCYFRKENLLEH------EA----------- 334

  Fly   210 RNSKKRKGPPKVYKCNEEACNQTFRTERDLRGHRWKHTGIF---CDICGKPFTQSGNMMRHR-QR 270
            ||...|.  .:|:.|:  .|.:|||...:||.|...|||..   |..|.:.|.|..::..|. :.
  Rat   335 RNCMNRS--EQVFTCS--VCQETFRRRMELRVHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKL 395

  Fly   271 HSGIKPH---------KC-------------------PECDATF----------YTQKELSS--- 294
            |...|||         .|                   |.|.|..          |:...|.|   
  Rat   396 HGAPKPHAVSAKQGWGSCGPWTAQPCPHLDSLPLPVSPSCSAPLVPSASCLGRSYSCTRLLSIVE 460

  Fly   295 -HSIC-----------------------------------HTGRMP---CIC-----------EV 309
             .|:|                                   |:.|.|   |.|           ..
  Rat   461 KSSLCVKNVGTGPQAAMGCRCTSRPSTGMKGRMSVSSAAMHSPRRPTSTCTCAHTQERSPSSATS 525

  Fly   310 CGRPCRD-------------RGVLTA----------HMRRHTGERPAKCEVCGKAFYSFHDLNVH 351
            .|||...             |.||::          |.|.||||||..||.|.:.|.....|..|
  Rat   526 VGRPSAPKVRQARPLLASGLRQVLSSTLSPTASLDKHNRTHTGERPFSCEFCEQRFTEKGPLLRH 590

  Fly   352 AVS-HTNLRPFVCDVCGSTFQRKKALRVHKLLHSEQRKYACKLCGKTFAQSGGLNAHMRSHDPAR 415
            ..| |...||..|.:||.||:..:.||||...|...||:.|..||..|.:...|..||..||  |
  Rat   591 VASRHQEGRPHFCQICGKTFKAVEQLRVHVRRHKGVRKFECTECGYKFTRQAHLRRHMEIHD--R 653

  Fly   416 VKGAVKPLPQSVTIEVIEGKSPPTTTITMAIDLNV 450
            |:. ..|..:.:...:|:.:......:....||.|
  Rat   654 VEN-YNPRQRKLRNLIIDDEKMVVVALQPPADLEV 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 35/185 (19%)
C2H2 Zn finger 224..246 CDD:275368 8/21 (38%)
C2H2 Zn finger 251..271 CDD:275368 5/20 (25%)
zf-H2C2_2 263..288 CDD:463886 9/63 (14%)
C2H2 Zn finger 279..327 CDD:275368 22/152 (14%)
zf-H2C2_2 320..342 CDD:463886 12/31 (39%)
C2H2 Zn finger 335..355 CDD:275368 7/20 (35%)
C2H2 Zn finger 363..383 CDD:275368 9/19 (47%)
zf-C2H2 389..411 CDD:395048 7/21 (33%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
Zbtb48XP_038966377.1 BTB_POZ_ZBTB48_TZAP_KR3 8..115 CDD:349541
C2H2 Zn finger 288..308 CDD:275368 2/3 (67%)
zf-H2C2_2 300..323 CDD:463886 7/35 (20%)
C2H2 Zn finger 316..367 CDD:275368 20/71 (28%)
zf-C2H2 345..367 CDD:395048 8/23 (35%)
zf-H2C2_2 359..382 CDD:463886 8/22 (36%)
C2H2 Zn finger 375..396 CDD:275368 5/20 (25%)
C2H2 Zn finger 574..595 CDD:275368 7/20 (35%)
C2H2 Zn finger 603..623 CDD:275368 9/19 (47%)
zf-H2C2_2 616..640 CDD:463886 11/23 (48%)
zf-C2H2 629..651 CDD:395048 7/21 (33%)
C2H2 Zn finger 631..651 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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