DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and CG1602

DIOPT Version :10

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_610291.2 Gene:CG1602 / 35684 FlyBaseID:FBgn0033186 Length:577 Species:Drosophila melanogaster


Alignment Length:405 Identity:114/405 - (28%)
Similarity:166/405 - (40%) Gaps:98/405 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 YEVSCLLCDQRLPLDGYPEHFRLKHFTNSSSSLCSNE------LESDPIAQDVVEVQGN-EELHE 87
            |::.|.|                 :.:|......:||      .:.:.:..|::|:..| .:|::
  Fly   238 YKLCCFL-----------------NASNDEEGATNNEKIKLDFSKKNKLTTDLIEMYANFPQLYD 285

  Fly    88 ELAKEASPDLEEEEEEKEEGSKRQHYQRAAAMKNTLVETREDLLDIELDWTGGEQSEHNETHEEE 152
            ...||.|          ...|::|.|:..||      |.....:||                   
  Fly   286 SNHKEFS----------NMSSRKQAYESMAA------EISVPNVDI------------------- 315

  Fly   153 EGESDDDDTKDSNDTKDMLFQCDQCDRAYNTKRSLQSHRRLKHSEANGGSLDKSASERNSKKRKG 217
              .|||            :|:..|..|.:..|.:       ||:...|.:.:|...|   ..|..
  Fly   316 --NSDD------------IFRAIQNLRQWYYKNT-------KHAIYAGSTAEKFYLE---VCRFM 356

  Fly   218 PPKVYK----CNEEACNQTFRTERDLRGHRWKHTGI-----FCDICGKPFTQSGNMMRHRQR-HS 272
            |.|:||    |  |.|:|...::..|:.|.:|...|     .|.:|.:.|.....:..|.|| |.
  Fly   357 PAKMYKQRLVC--EFCHQITSSDHVLQSHIFKAHNIGELPFKCTLCDRSFVGRCELANHIQRVHI 419

  Fly   273 GIKPHKCPECDATFYTQKELSSHSICHTGRMPCICEVCGRPCRDRGVLTAHMRR-HTGERPAKCE 336
            | |.|||..|:.:|....:|..|...|||..|.:||.||:..|.|..:|.|:.. ||..|..||.
  Fly   420 G-KTHKCTHCERSFAVMSDLQLHIRTHTGHKPYVCEHCGKAFRLRSQMTLHVTAIHTKIRAFKCT 483

  Fly   337 VCGKAFYSFHDLNVHAVSHTNLRPFVCDVCGSTFQRKKALRVHKLLHSEQRKYACKLCGKTFAQS 401
            :|.|.|....||:.|...|.|:|..:|.|||..|....||..|:.:|||.:|:.||||...|:|.
  Fly   484 MCPKDFVKKVDLSDHIKGHLNIRDKICSVCGKGFTSCHALIRHRQIHSEVKKFVCKLCDSRFSQF 548

  Fly   402 GGLNAHM-RSHDPAR 415
            .|||.|| |:|:..|
  Fly   549 VGLNTHMKRTHNILR 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 34/100 (34%)
C2H2 Zn finger 224..246 CDD:275368 6/21 (29%)
C2H2 Zn finger 251..271 CDD:275368 6/20 (30%)
zf-H2C2_2 263..288 CDD:463886 11/25 (44%)
C2H2 Zn finger 279..327 CDD:275368 17/48 (35%)
zf-H2C2_2 320..342 CDD:463886 9/22 (41%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 8/19 (42%)
zf-C2H2 389..411 CDD:395048 12/22 (55%)
C2H2 Zn finger 391..411 CDD:275368 12/20 (60%)
CG1602NP_610291.2 MADF_DNA_bdg 157..244 CDD:463144 2/5 (40%)
MADF_DNA_bdg 273..356 CDD:463144 27/141 (19%)
C2H2 Zn finger 367..388 CDD:275368 7/22 (32%)
C2H2 Zn finger 397..418 CDD:275368 6/20 (30%)
C2H2 Zn finger 425..445 CDD:275368 5/19 (26%)
zf-H2C2_2 437..460 CDD:463886 10/22 (45%)
C2H2 Zn finger 453..470 CDD:275368 7/16 (44%)
C2H2 Zn finger 482..502 CDD:275368 7/19 (37%)
C2H2 Zn finger 510..530 CDD:275368 8/19 (42%)
C2H2 Zn finger 538..559 CDD:275368 12/20 (60%)

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