DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18262 and CG17568

DIOPT Version :10

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster


Alignment Length:539 Identity:131/539 - (24%)
Similarity:196/539 - (36%) Gaps:149/539 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IKVQPPPDVAGGYHNLRCGEVLFSAPASY---------EVSCLLC-------------------- 37
            :|||...:..|.:.|     ||..|...|         |:|.:||                    
  Fly    23 VKVQMNENSQGNWDN-----VLIMAIRKYFEVQMQLEDELSSVLCTECYTLISELIDFAEHVTKV 82

  Fly    38 --------------DQRLPLDGYPEHFRL--KHFTNSSSSLCSNELESDPIAQDVVEVQGNEELH 86
                          ||.:.:....:.|.|  ..:|:....:.:.|:|||.:.|...|:..:..|.
  Fly    83 QDIFEVLRRTETDGDQEMDVAALRQQFGLCDDDWTHIIKPIPALEMESDNVYQKPAELLKDFPLA 147

  Fly    87 E------ELAKEASPD--LEEEEEEKEEGSKRQHYQRAAAM--KNTLVETREDLLD--------- 132
            |      |::|..:..  ::.::..:.|..|::.......:  |||.....||:||         
  Fly   148 ETSSQEMEISKRTTTTHLIQTKKNVEMEIPKQEFIDLGPILLEKNTSQLDMEDVLDELPQEELSQ 212

  Fly   133 IELDWTGGEQSEHNETHEE--EEGESDDDDTKDSNDTKDML---------------------FQC 174
            ..||.|....|..|:...|  :..|.|||.........|::                     ..|
  Fly   213 PRLDSTTSPASMENDVKSEMLDSCEGDDDFLPVDGQLMDLVAVATTPNTLESTAEEKAKRGRMDC 277

  Fly   175 DQCDRAYNTKRSLQSHRRLKHSEANGGSLDKSASERNSKKRKGPPKVYKCNEEACNQTFRTERDL 239
            ::|.:.|..:.|.:.|.                                  |..|.   |.||.:
  Fly   278 EKCGKVYRNRASYEKHL----------------------------------ERECR---RIERRV 305

  Fly   240 RGHRWKHTGIFCDICGKPFTQSGNMMRHRQR-HSGIKPHKCPECDATFYTQKELSSHSICHTGRM 303
            :..:   |...||||.|..:.:..:..|::. |..:||:.|..|.....|...|:.|.:.||...
  Fly   306 KVDK---TTTTCDICNKTLSSATALKLHKEGIHQNVKPYICDSCGKQLKTITALNEHKLVHTESR 367

  Fly   304 PCICEVCGRPCRDRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVHAVSHTNLRPFVCDVCGS 368
            |..|.||....::|..|.||.:.| .|....|.:|||...:....|:|.|.||..|...|||||:
  Fly   368 PFECTVCKAGFKNRARLKAHYQIH-AEPSFVCNICGKKLQTRRTWNMHKVVHTEERRLKCDVCGA 431

  Fly   369 TFQRKKALRVHKLLHSEQRKYACKLCGKTFAQSGGLNAHMRSH----DPARVK---GAVKP---- 422
            .|:|.|.|:.|.|.|:..|.|.|..|||:||    .||:.|||    .|..|:   ||..|    
  Fly   432 LFKRSKTLKTHLLSHTGLRPYVCNYCGKSFA----CNANCRSHKLKKHPQEVQQEDGARLPSRLN 492

  Fly   423 LPQSVTIEVIEGKSPPTTT 441
            :|....:.|:..|.|..||
  Fly   493 VPTLDELRVMTQKLPKGTT 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 26/91 (29%)
C2H2 Zn finger 224..246 CDD:275368 5/21 (24%)
C2H2 Zn finger 251..271 CDD:275368 6/20 (30%)
zf-H2C2_2 263..288 CDD:463886 6/25 (24%)
C2H2 Zn finger 279..327 CDD:275368 15/47 (32%)
zf-H2C2_2 320..342 CDD:463886 9/21 (43%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 11/19 (58%)
zf-C2H2 389..411 CDD:395048 10/21 (48%)
C2H2 Zn finger 391..411 CDD:275368 9/19 (47%)
CG17568NP_609951.2 zf-AD 10..87 CDD:214871 13/68 (19%)
COG5048 <313..471 CDD:227381 60/162 (37%)
C2H2 Zn finger 314..335 CDD:275368 6/20 (30%)
C2H2 Zn finger 343..363 CDD:275368 5/19 (26%)
C2H2 Zn finger 371..391 CDD:275368 7/19 (37%)
C2H2 Zn finger 398..418 CDD:275368 7/19 (37%)
C2H2 Zn finger 426..446 CDD:275368 11/19 (58%)
C2H2 Zn finger 454..475 CDD:275368 11/24 (46%)

Return to query results.
Submit another query.