DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18262 and CG17568

DIOPT Version :9

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster


Alignment Length:539 Identity:131/539 - (24%)
Similarity:196/539 - (36%) Gaps:149/539 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IKVQPPPDVAGGYHNLRCGEVLFSAPASY---------EVSCLLC-------------------- 37
            :|||...:..|.:.|     ||..|...|         |:|.:||                    
  Fly    23 VKVQMNENSQGNWDN-----VLIMAIRKYFEVQMQLEDELSSVLCTECYTLISELIDFAEHVTKV 82

  Fly    38 --------------DQRLPLDGYPEHFRL--KHFTNSSSSLCSNELESDPIAQDVVEVQGNEELH 86
                          ||.:.:....:.|.|  ..:|:....:.:.|:|||.:.|...|:..:..|.
  Fly    83 QDIFEVLRRTETDGDQEMDVAALRQQFGLCDDDWTHIIKPIPALEMESDNVYQKPAELLKDFPLA 147

  Fly    87 E------ELAKEASPD--LEEEEEEKEEGSKRQHYQRAAAM--KNTLVETREDLLD--------- 132
            |      |::|..:..  ::.::..:.|..|::.......:  |||.....||:||         
  Fly   148 ETSSQEMEISKRTTTTHLIQTKKNVEMEIPKQEFIDLGPILLEKNTSQLDMEDVLDELPQEELSQ 212

  Fly   133 IELDWTGGEQSEHNETHEE--EEGESDDDDTKDSNDTKDML---------------------FQC 174
            ..||.|....|..|:...|  :..|.|||.........|::                     ..|
  Fly   213 PRLDSTTSPASMENDVKSEMLDSCEGDDDFLPVDGQLMDLVAVATTPNTLESTAEEKAKRGRMDC 277

  Fly   175 DQCDRAYNTKRSLQSHRRLKHSEANGGSLDKSASERNSKKRKGPPKVYKCNEEACNQTFRTERDL 239
            ::|.:.|..:.|.:.|.                                  |..|.   |.||.:
  Fly   278 EKCGKVYRNRASYEKHL----------------------------------ERECR---RIERRV 305

  Fly   240 RGHRWKHTGIFCDICGKPFTQSGNMMRHRQR-HSGIKPHKCPECDATFYTQKELSSHSICHTGRM 303
            :..:   |...||||.|..:.:..:..|::. |..:||:.|..|.....|...|:.|.:.||...
  Fly   306 KVDK---TTTTCDICNKTLSSATALKLHKEGIHQNVKPYICDSCGKQLKTITALNEHKLVHTESR 367

  Fly   304 PCICEVCGRPCRDRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVHAVSHTNLRPFVCDVCGS 368
            |..|.||....::|..|.||.:.| .|....|.:|||...:....|:|.|.||..|...|||||:
  Fly   368 PFECTVCKAGFKNRARLKAHYQIH-AEPSFVCNICGKKLQTRRTWNMHKVVHTEERRLKCDVCGA 431

  Fly   369 TFQRKKALRVHKLLHSEQRKYACKLCGKTFAQSGGLNAHMRSH----DPARVK---GAVKP---- 422
            .|:|.|.|:.|.|.|:..|.|.|..|||:||    .||:.|||    .|..|:   ||..|    
  Fly   432 LFKRSKTLKTHLLSHTGLRPYVCNYCGKSFA----CNANCRSHKLKKHPQEVQQEDGARLPSRLN 492

  Fly   423 LPQSVTIEVIEGKSPPTTT 441
            :|....:.|:..|.|..||
  Fly   493 VPTLDELRVMTQKLPKGTT 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 C2H2 Zn finger 224..246 CDD:275368 5/21 (24%)
C2H2 Zn finger 251..271 CDD:275368 6/20 (30%)
COG5048 <256..415 CDD:227381 58/163 (36%)
zf-H2C2_2 263..288 CDD:290200 6/25 (24%)
C2H2 Zn finger 279..327 CDD:275368 15/47 (32%)
zf-H2C2_2 320..342 CDD:290200 9/21 (43%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 11/19 (58%)
zf-C2H2 389..411 CDD:278523 10/21 (48%)
C2H2 Zn finger 391..411 CDD:275368 9/19 (47%)
CG17568NP_609951.2 zf-AD 10..87 CDD:214871 13/68 (19%)
COG5048 <313..471 CDD:227381 60/162 (37%)
C2H2 Zn finger 314..335 CDD:275368 6/20 (30%)
C2H2 Zn finger 343..363 CDD:275368 5/19 (26%)
C2H2 Zn finger 371..391 CDD:275368 7/19 (37%)
C2H2 Zn finger 398..418 CDD:275368 7/19 (37%)
C2H2 Zn finger 426..446 CDD:275368 11/19 (58%)
zf-H2C2_2 439..463 CDD:290200 12/27 (44%)
C2H2 Zn finger 454..475 CDD:275368 11/24 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.