DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and CG17612

DIOPT Version :10

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster


Alignment Length:447 Identity:98/447 - (21%)
Similarity:146/447 - (32%) Gaps:131/447 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 LESDPIAQDVVEVQGNEELHEELAKEASPDLEEEEEEKEE-----------------GSKRQHYQ 114
            ||..|...||:.:|      :.:|:|..|.::||..|.|:                 ||.|...:
  Fly   134 LEDHPANNDVIIIQ------DSVAEEELPVIKEEAIEGEDLQGEYFIITECLEEPAIGSCRVCLE 192

  Fly   115 RAAAMKNTLVETRE---DLLDIELDWTGGEQSEHNETHEEEEGESDD---------------DDT 161
            ::..:.|...:..:   .:..|...:||         ...|:|:|..               ||.
  Fly   193 QSDNLTNIFDDAHQYGIPIATILSQYTG---------MPVEKGDSFSEYICVTCLDVVKNAFDDL 248

  Fly   162 KDSNDTKDMLFQ-----------------------------CDQCDRAYNTKRSLQSHRRLKHSE 197
            :...:|..|..|                             |.||.:.:.....||:|.|     
  Fly   249 ESKENTIQMYRQPKEEIIDIDSIPVKNKPVDYEVTGKPPHRCPQCPKIFLLAAKLQAHIR----- 308

  Fly   198 ANGGSLDKSASERNSKKRKGPPKVYKCNEEACNQTFRTERDLRGHRWKHTG-----------IFC 251
                       ..|..:...||:: ||  ..|...:.....|..|.|.|..           ..|
  Fly   309 -----------THNETRTTEPPRL-KC--PMCPSIYMKRGCLEAHMWIHRASDERESELEPPYRC 359

  Fly   252 DICGKPFTQSGNMMRHRQRHSGI-------KPHKCPECDATFYTQKELSSHSICHTGRMPCICEV 309
            ..|.|.|..|..:..|.|.|..:       ..|||.:|...|.....|..|...|.|.....|.:
  Fly   360 PHCPKLFLYSSFLEIHIQTHEDVSQRLSRKSSHKCAQCADVFSDVSSLKDHVKIHAGERTFKCPL 424

  Fly   310 CGRPCRDRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVH-AVSHTNLRPFVCDVCGSTFQRK 373
            |....::...|.:|...||   ..||..|.|.|.|.:.|:.| ..|||...||.|..|..|||::
  Fly   425 CLMSFQEESNLKSHDCAHT---RFKCHKCSKFFESQNYLDFHFKKSHTTKGPFKCIKCQQTFQKR 486

  Fly   374 KALRVH-------KLLHSEQ--RKYACKLCGKTFAQSGGLNAHMRSHDPARVKGAVK 421
            ..|:.|       :.|.|:.  :.:.|..|.|.|:.......|..:|  .:||..::
  Fly   487 NGLKEHISSQVCVQFLRSKSPGQIFPCPKCPKKFSIEDNYQMHHATH--KKVKTVIE 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 26/108 (24%)
C2H2 Zn finger 224..246 CDD:275368 5/21 (24%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
zf-H2C2_2 263..288 CDD:463886 8/31 (26%)
C2H2 Zn finger 279..327 CDD:275368 11/47 (23%)
zf-H2C2_2 320..342 CDD:463886 8/21 (38%)
C2H2 Zn finger 335..355 CDD:275368 7/20 (35%)
C2H2 Zn finger 363..383 CDD:275368 7/26 (27%)
zf-C2H2 389..411 CDD:395048 5/21 (24%)
C2H2 Zn finger 391..411 CDD:275368 5/19 (26%)
CG17612NP_608824.1 zf-AD 187..>246 CDD:462262 8/67 (12%)
C2H2 Zn finger 290..310 CDD:275368 7/35 (20%)
C2H2 Zn finger 323..343 CDD:275370 5/21 (24%)
C2H2 Zn finger 359..379 CDD:275368 7/19 (37%)
C2H2 Zn finger 394..414 CDD:275368 5/19 (26%)
C2H2 Zn finger 422..438 CDD:275368 3/15 (20%)
C2H2 Zn finger 447..463 CDD:275368 6/15 (40%)
C2H2 Zn finger 476..505 CDD:275368 8/28 (29%)
C2H2 Zn finger 513..533 CDD:275368 5/19 (26%)
C2H2 Zn finger 545..565 CDD:275368
C2H2 Zn finger 568..584 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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