DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and CG3407

DIOPT Version :10

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_608809.1 Gene:CG3407 / 33606 FlyBaseID:FBgn0031573 Length:714 Species:Drosophila melanogaster


Alignment Length:521 Identity:127/521 - (24%)
Similarity:184/521 - (35%) Gaps:150/521 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 APASYEVSCLLCDQRLPLDGYPEHFRLKHFTNSSSSLCSNELE-----SDPIAQ-------DVVE 78
            ||:|. .||.:|       ||..|.:|..|.:.........||     .||..|       |:..
  Fly   161 APSSL-YSCEIC-------GYAVHTQLDFFAHLKQHYEPTVLEQRLVVQDPQQQHQQKEPLDMCG 217

  Fly    79 VQGNEELHEELAK-------------------------------------------------EAS 94
            :...::|.:|.||                                                 .::
  Fly   218 LSAQDKLQQEQAKLDQVFQDVQLNFENFHNISHHVNDVANVGVNMVLHGQATDKLNAVVVNTSST 282

  Fly    95 P-------DLE-EEEEEKEEGSKRQHYQRAAAMKNTLVETREDLLDIELDWTG------------ 139
            |       |:| .:.|:..||.      |....|.::.:|.::|:|:||..:|            
  Fly   283 PNSVPVVDDVEFSDTEDMLEGI------RNVVDKVSIEDTCDELVDLELTSSGMTAPWFNNNFRD 341

  Fly   140 ---------GE--------------QSEHNETH------------EEEEGESDDDDTKDSNDTKD 169
                     ||              ::.|...|            .:||.:.:...:|.....:.
  Fly   342 ITFPALLLPGEPPPASSEPATPLLKENPHVGDHMALDFLSPEKADPQEEAKLEKTLSKACEPNEQ 406

  Fly   170 MLF------QCDQCDRAYNTKRSLQSHRR--LKHSEANGGSLDKSASER-NSKKRKGPPKVYKCN 225
            .|.      |............|::..||  |:.|||.....|.....| .|...:|.|...:.|
  Fly   407 TLLVAPPACQTPPIPTVPPANSSIEQLRRSPLELSEAFKLEEDDMTDSRPASSFEEGDPDAEEPN 471

  Fly   226 EEACNQ-----TFRTERDLRGHRWKHTGIFCDICGKPFTQSGNMMRHRQRHSGIKPHKCPECDAT 285
            |  |.|     |..||......|.||   |||.|.:.|.....:..|:..|:..:.|||..|:.:
  Fly   472 E--CFQMEVLDTSLTEEAENKTRRKH---FCDKCNRDFNSYNALKYHQYTHNQERSHKCDSCERS 531

  Fly   286 FYTQKELSSHSICHTGRMPCICEVCGRPCRDRGVLTAH-MRRHTGERPAKCEVCGKAFYSFHDLN 349
            ||||..|.:|...|:|..|..|:.|....|..|.|..| :.||:..:...||.|||:|...:.|.
  Fly   532 FYTQSALKAHERTHSGVKPFKCDKCEFQFRQWGDLKYHIISRHSDVKAHMCEFCGKSFSRRYSLV 596

  Fly   350 VHAVSHTNLRPFVCDVCGSTFQRKKALRVHKLLHSEQRKYACKLCGKTFAQSGGLNAHMRSHDPA 414
            ||...||..:.:.|..|..||:....|..|..:|:.:|.|.|.:|.|.|..||.|..|.|.|||:
  Fly   597 VHRRIHTREKNYACQYCDKTFRASSYLLSHIKVHTGERPYECSICEKKFRVSGDLKRHSRIHDPS 661

  Fly   415 R 415
            |
  Fly   662 R 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 32/95 (34%)
C2H2 Zn finger 224..246 CDD:275368 8/26 (31%)
C2H2 Zn finger 251..271 CDD:275368 5/19 (26%)
zf-H2C2_2 263..288 CDD:463886 7/24 (29%)
C2H2 Zn finger 279..327 CDD:275368 17/48 (35%)
zf-H2C2_2 320..342 CDD:463886 9/22 (41%)
C2H2 Zn finger 335..355 CDD:275368 9/19 (47%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
zf-C2H2 389..411 CDD:395048 10/21 (48%)
C2H2 Zn finger 391..411 CDD:275368 9/19 (47%)
CG3407NP_608809.1 COG5048 <494..656 CDD:227381 58/164 (35%)
C2H2 Zn finger 497..517 CDD:275368 5/19 (26%)
C2H2 Zn finger 525..545 CDD:275368 8/19 (42%)
C2H2 Zn finger 555..574 CDD:275371 5/18 (28%)
C2H2 Zn finger 582..602 CDD:275368 9/19 (47%)
C2H2 Zn finger 610..630 CDD:275368 6/19 (32%)
C2H2 Zn finger 638..658 CDD:275368 9/19 (47%)

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