DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and CG2116

DIOPT Version :9

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_572444.2 Gene:CG2116 / 31735 FlyBaseID:FBgn0030003 Length:598 Species:Drosophila melanogaster


Alignment Length:378 Identity:94/378 - (24%)
Similarity:152/378 - (40%) Gaps:70/378 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 NELESDPIAQDVVEVQG-------NEELHEELAKEASPDLEEEEEEKEEGSKRQHYQRAAAMKNT 122
            ||.|.|.|   :|...|       ::||.:.:......||.::|:      ..|...|...|...
  Fly    50 NEFEEDII---IVNENGVEKEMLMSKELRDFIVGSRVKDLTDDEQ------MPQFVVRELDMSEV 105

  Fly   123 --LVETREDLLDIELDWTGGEQSEHNETH----EEEEGESDDDDTKDSNDT--------KDMLFQ 173
              |||. |..::.|.|:......||..::    :.|..|.|.|....|:.:        ...:.|
  Fly   106 GDLVEV-EPEMEQEADYGDYGDYEHEPSYGHPRDNERVEEDLDMYPPSSPSLPPSPPRPPSPVVQ 169

  Fly   174 CDQCDRAYNTKR--SLQSHRRLKHSEANGGSL-DKSASERNSKKRKGPPKVYKCNEEACNQTFRT 235
              ...:|.|:.|  :|:|....|:::.:.||: :...||:..::.|||.: |...::........
  Fly   170 --PASKARNSARQIALRSFVSQKNNDDDDGSVKEVKPSEKMLEEFKGPRR-YMLFDDLIATIVDF 231

  Fly   236 ERDLRGHRWKHTGIFCDICGKP---FTQSGNMMRHRQRHSGIKPHKCPECDATFYTQKELSSHSI 297
            :.|                ..|   |:...::|..:      .|.:|..|....:..| ||.|..
  Fly   232 DED----------------STPLVEFSMISDIMDEK------LPVECGICPDVMHKSK-LSKHHK 273

  Fly   298 CH----TGRMPCICEVCGRPCRDRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVHAVSHTNL 358
            .|    |.|..||  .|....||...|..|.|||.|.||..||:|...|.:..||.||.......
  Fly   274 THLVPGTNRYACI--YCTETYRDCKYLAGHARRHMGIRPYVCELCTLYFSTKQDLRVHNQRRHLE 336

  Fly   359 RPFVCDVCGSTFQRKKALRVHK-LLHSEQRKYACKLCGKTFAQSGGLNAHMRS 410
            :..:|:|||.||.:...|:.|: ..|.::|::.|:.|.|.:.::..|..|:|:
  Fly   337 KEHICEVCGKTFAQNTQLKRHREATHEKKRRFQCEYCQKAYYKNFSLQEHIRN 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 C2H2 Zn finger 224..246 CDD:275368 1/21 (5%)
C2H2 Zn finger 251..271 CDD:275368 3/22 (14%)
COG5048 <256..415 CDD:227381 50/163 (31%)
zf-H2C2_2 263..288 CDD:290200 4/24 (17%)
C2H2 Zn finger 279..327 CDD:275368 17/51 (33%)
zf-H2C2_2 320..342 CDD:290200 11/21 (52%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 8/20 (40%)
zf-C2H2 389..411 CDD:278523 6/22 (27%)
C2H2 Zn finger 391..411 CDD:275368 6/20 (30%)
CG2116NP_572444.2 C2H2 Zn finger 256..275 CDD:275368 6/19 (32%)
C2H2 Zn finger 285..305 CDD:275368 8/21 (38%)
PHA00733 <308..357 CDD:177301 17/48 (35%)
C2H2 Zn finger 313..334 CDD:275368 8/20 (40%)
C2H2 Zn finger 341..362 CDD:275368 8/20 (40%)
C2H2 Zn finger 370..388 CDD:275368 5/17 (29%)
C2H2 Zn finger 400..418 CDD:275370
C2H2 Zn finger 429..447 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449765
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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