DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and si:dkey-122c11.8

DIOPT Version :9

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_017211097.1 Gene:si:dkey-122c11.8 / 108183696 ZFINID:ZDB-GENE-110913-23 Length:358 Species:Danio rerio


Alignment Length:344 Identity:101/344 - (29%)
Similarity:144/344 - (41%) Gaps:76/344 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 KEASPDLEEEEEEKEEGSKRQHYQRAAAMKNTLVETREDLLDIELDWTGGEQSE----HNETHEE 151
            ||.|.|::.||                    |....:|||         .||::    ..:||::
Zfish     5 KEESEDVKIEE--------------------TFTVKQEDL---------QEQTDLMLLKEKTHQQ 40

  Fly   152 EEGESDDDD-TKDSND--TKDML-------------FQCDQCDRAYNTKRSLQSHRRLKHSEANG 200
            .|.|....| |.|...  ||..|             |.|.||.::::.|..|..|.| .|:.   
Zfish    41 NEMEEKQQDMTTDEKPTLTKKTLSRGRPRKSKPRCNFSCKQCGKSFSQKPKLDVHIR-DHTR--- 101

  Fly   201 GSLDKSASERNSKKRKGPPKVYKCNEEACNQTFRTERDLRGHRWKHTG---IFCDICGKPFTQSG 262
                              .|.|.|.:  |.::|...|:|..|...|||   ..|..|||.|.::|
Zfish   102 ------------------EKAYTCKQ--CGKSFYNTRNLTVHMRIHTGERPYTCQQCGKSFHKTG 146

  Fly   263 NMMRHRQRHSGIKPHKCPECDATFYTQKELSSHSICHTGRMPCICEVCGRPCRDRGVLTAHMRRH 327
            |:..|.:.|:|.:|:.|.:|..:|.|...|:.|...|||..|..|..||:.......|..|||.|
Zfish   147 NLTVHLRIHTGERPYTCQQCGKSFQTTGNLTVHMRIHTGEKPYSCPQCGKSYSQNSNLEVHMRTH 211

  Fly   328 TGERPAKCEVCGKAFYSFHDLNVHAVSHTNLRPFVCDVCGSTFQRKKALRVHKLLHSEQRKYACK 392
            .|.|...|..|||.|....:|::|...||..:|:.|..||.:|..|..|:.|.::|:.::.:||.
Zfish   212 NGGRTFVCTQCGKRFVKKQNLDLHMRIHTGEKPYTCTECGKSFPYKSTLKHHMIVHTGEKPFACA 276

  Fly   393 LCGKTFAQSGGLNAHMRSH 411
            .|||:|..:..|..||..|
Zfish   277 QCGKSFTCNANLRNHMNGH 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 C2H2 Zn finger 224..246 CDD:275368 6/21 (29%)
C2H2 Zn finger 251..271 CDD:275368 8/19 (42%)
COG5048 <256..415 CDD:227381 56/156 (36%)
zf-H2C2_2 263..288 CDD:290200 8/24 (33%)
C2H2 Zn finger 279..327 CDD:275368 17/47 (36%)
zf-H2C2_2 320..342 CDD:290200 11/21 (52%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
zf-C2H2 389..411 CDD:278523 9/21 (43%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
si:dkey-122c11.8XP_017211097.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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