DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and LOC108179143

DIOPT Version :10

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_068072700.1 Gene:LOC108179143 / 108179143 -ID:- Length:590 Species:Danio rerio


Alignment Length:335 Identity:96/335 - (28%)
Similarity:143/335 - (42%) Gaps:64/335 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 ETREDLLDIELDWTGGEQSEHNETHEEEEGESDDDDTKDSNDTK---DMLFQCDQCDR----AYN 182
            |..|:|:|:.:.    |:||..|.|:.:..|:....|:.....|   :..|.|..|.:    .||
Zfish    12 EETEELIDVIVK----EESEDEEKHQVKSEETTHTKTEHGISVKTEAEKCFICALCGKNFTCKYN 72

  Fly   183 TKRSLQSH------------RRLKHSEANGGSLDKSASERNSKKRKGPPKVYKCNEEACNQTFRT 235
            .||.:..|            :|.:||    |.|  .|.||.....    |.|:|.:  |.::|:.
Zfish    73 LKRHMMIHTGEKPLKCSHCEKRFRHS----GHL--KAHERTHTGE----KPYRCTD--CGKSFKQ 125

  Fly   236 ERDLRGHRWK--------------------------HTGI---FCDICGKPFTQSGNMMRHRQRH 271
            ...||.||.|                          ||.:   .|.:|||.|||..::::|::.|
Zfish   126 LCVLRNHRNKGHDLIVKKVERVKTRKSDDKKVQRRVHTEVKPTSCSMCGKSFTQRAHLIQHQRIH 190

  Fly   272 SGIKPHKCPECDATFYTQKELSSHSICHTGRMPCICEVCGRPCRDRGVLTAHMRRHTGERPAKCE 336
            :|.:|:.|..|..:|.....|:.|.:.|||.....|:.||:.......||.|::.||.|:|..|.
Zfish   191 TGERPYTCDRCGKSFNQSSALNQHMLTHTGEKTHKCDHCGKTFLRSTDLTRHLKIHTKEKPYSCS 255

  Fly   337 VCGKAFYSFHDLNVHAVSHTNLRPFVCDVCGSTFQRKKALRVHKLLHSEQRKYACKLCGKTFAQS 401
            .|||:|....:|..|...||.....||..||.|:.....|:.|:.:||.::.|.|..|.:.|...
Zfish   256 ECGKSFSQQAELKYHQKKHTGEIEHVCFECGKTYDTALGLKKHQKIHSGEKPYKCSHCDRRFRVF 320

  Fly   402 GGLNAHMRSH 411
            ..|.||.|.|
Zfish   321 YMLKAHERIH 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 33/119 (28%)
C2H2 Zn finger 224..246 CDD:275368 8/47 (17%)
C2H2 Zn finger 251..271 CDD:275368 8/19 (42%)
zf-H2C2_2 263..288 CDD:463886 7/24 (29%)
C2H2 Zn finger 279..327 CDD:275368 14/47 (30%)
zf-H2C2_2 320..342 CDD:463886 11/21 (52%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
zf-C2H2 389..411 CDD:395048 8/21 (38%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
LOC108179143XP_068072700.1 SFP1 <19..138 CDD:227516 35/134 (26%)
C2H2 Zn finger 60..80 CDD:275368 6/19 (32%)
C2H2 Zn finger 88..108 CDD:275368 8/25 (32%)
C2H2 Zn finger 116..133 CDD:275368 5/18 (28%)
C2H2 Zn finger 170..190 CDD:275368 8/19 (42%)
COG5048 194..584 CDD:227381 46/137 (34%)
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
C2H2 Zn finger 310..330 CDD:275368 7/19 (37%)
C2H2 Zn finger 428..448 CDD:275368
C2H2 Zn finger 456..476 CDD:275368
C2H2 Zn finger 484..504 CDD:275368
C2H2 Zn finger 512..532 CDD:275368
C2H2 Zn finger 540..560 CDD:275368
C2H2 Zn finger 568..588 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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