DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and si:ch73-40a17.4

DIOPT Version :10

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_005171145.1 Gene:si:ch73-40a17.4 / 100149710 ZFINID:ZDB-GENE-131127-71 Length:408 Species:Danio rerio


Alignment Length:395 Identity:105/395 - (26%)
Similarity:161/395 - (40%) Gaps:93/395 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 ELAKEASPDLEEEEEEKEEGSKRQHYQRAAAMKNTLVETREDLLDIELDWTGGEQSEHNE----T 148
            |:.:|.|.|..:.|::.||                    .:.:::::.:....|::|.||    |
Zfish     2 EMVREESEDKSDAEQDAEE--------------------HKGMMEVKDEHKEPEEAEMNEQMNIT 46

  Fly   149 HEEEEGESDDDDTKDSN------------------------------DTKDMLFQCDQCDRAYNT 183
            :||:...|..:|.:.|.                              .|.:..:.|.||.:::..
Zfish    47 NEEQSCSSSRNDNQVSQAETQSKHSFICSECGKSFTRRGHLRIHMIIHTGERPYTCIQCQKSFTC 111

  Fly   184 KRSLQSHRRLKHSEAN------GGSLDKSASERNSKKRKGPPKVYKCNEEACNQTFRTERDLRGH 242
            |.||:.|.::...|..      |.|..:....:...:.....|.:.|.:  |.::|.:..|||.|
Zfish   112 KGSLKDHCKIHSGEKPFMCPQCGWSFARQEDLKRHIRIHTGEKPFSCAQ--CTKSFTSSGDLRRH 174

  Fly   243 RWKHTG------------------------------IF-CDICGKPFTQSGNMMRHRQRHSGIKP 276
            ...|:|                              :| |.:|||.||...::.||.:.|||.|.
Zfish   175 VRIHSGERPFSCAQCKKSFTQKEGLKEHAKIHSGEKLFACMLCGKSFTHQRSLKRHMKVHSGEKL 239

  Fly   277 HKCPECDATFYTQKELSSHSICHTGRMPCICEVCGRPCRDRGVLTAHMRRHTGERPAKCEVCGKA 341
            |:||||...|.....|.:|.:.|||..|..||.|.:.......|..|||.|..||...|..|||:
Zfish   240 HQCPECGRRFAEAGNLKTHLLSHTGERPFSCEKCEKKFFLAVHLKTHMRIHEDERRYVCSFCGKS 304

  Fly   342 FYSFHDLNVHAVSHTNLRPFVCDVCGSTFQRKKALRVHKLLHSEQRKYACKLCGKTFAQSGGLNA 406
            |...:....|..:|...:|:||..|||||.|...|:||:.:|:.::.|.|..|.|:|.|||.|..
Zfish   305 FLWLNGFKDHQKTHIGEKPYVCLECGSTFIRPGELKVHERIHTGEKPYKCSHCEKSFTQSGALKI 369

  Fly   407 HMRSH 411
            |.|.|
Zfish   370 HKRVH 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 37/121 (31%)
C2H2 Zn finger 224..246 CDD:275368 7/21 (33%)
C2H2 Zn finger 251..271 CDD:275368 8/19 (42%)
zf-H2C2_2 263..288 CDD:463886 12/24 (50%)
C2H2 Zn finger 279..327 CDD:275368 18/47 (38%)
zf-H2C2_2 320..342 CDD:463886 11/21 (52%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 10/19 (53%)
zf-C2H2 389..411 CDD:395048 11/21 (52%)
C2H2 Zn finger 391..411 CDD:275368 10/19 (53%)
si:ch73-40a17.4XP_005171145.1 zf-C2H2 72..94 CDD:395048 0/21 (0%)
C2H2 Zn finger 74..94 CDD:275368 0/19 (0%)
zf-H2C2_2 86..111 CDD:463886 4/24 (17%)
C2H2 Zn finger 102..122 CDD:275368 7/19 (37%)
COG5048 126..>401 CDD:227381 79/251 (31%)
C2H2 Zn finger 130..150 CDD:275368 2/19 (11%)
C2H2 Zn finger 158..178 CDD:275368 7/21 (33%)
C2H2 Zn finger 186..206 CDD:275368 0/19 (0%)
C2H2 Zn finger 214..234 CDD:275368 8/19 (42%)
C2H2 Zn finger 242..262 CDD:275368 7/19 (37%)
C2H2 Zn finger 270..290 CDD:275368 7/19 (37%)
C2H2 Zn finger 298..318 CDD:275368 6/19 (32%)
C2H2 Zn finger 326..346 CDD:275368 10/19 (53%)
C2H2 Zn finger 354..374 CDD:275368 10/19 (53%)
C2H2 Zn finger 382..400 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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