DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta5 and Gnb5

DIOPT Version :10

Sequence 1:NP_572452.1 Gene:Gbeta5 / 31744 FlyBaseID:FBgn0030011 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_113958.1 Gene:Gnb5 / 83579 RGDID:620759 Length:353 Species:Rattus norvegicus


Alignment Length:344 Identity:237/344 - (68%)
Similarity:288/344 - (83%) Gaps:2/344 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EKMASLVREAENLKTKLEEERQKLNDVNLSNIAERLEQIAYVNIKPRKVLKGHQAKVLCTDWSPD 81
            |.:|||..|||:||.||||||.||:||.|..:|||:|.:....:|.|:.||||..||||.||..|
  Rat    10 ETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGNKVLCMDWCKD 74

  Fly    82 KRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYPITSD-- 144
            ||.|:||||||::|:||:||||||||||||.||:|||||||||..:||||||||.:|||:|.|  
  Rat    75 KRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKN 139

  Fly   145 EEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLA 209
            |.|||||::|..||:|:|.|.:.|||.||||.|||.|||||||||||||||||||..||:.:|||
  Rat   140 ENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLA 204

  Fly   210 PNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMR 274
            |:|||||||||.||:.|.:||||||..||:||.|:||||||:::|.|||.|:||||::|||||:|
  Rat   205 PSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLR 269

  Fly   275 ADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVS 339
            ||||||:::|||||||.:|||||:|||||||||||||:|:||.||..||.:|:||||:||.::||
  Rat   270 ADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVS 334

  Fly   340 PDGTALSTGSWDYTIRVWA 358
            |||||..:||||:|:||||
  Rat   335 PDGTAFCSGSWDHTLRVWA 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta5NP_572452.1 WD40 62..358 CDD:238121 210/297 (71%)
WD40 repeat 73..110 CDD:293791 27/36 (75%)
WD40 repeat 116..156 CDD:293791 29/41 (71%)
WD40 repeat 161..197 CDD:293791 27/35 (77%)
WD40 repeat 204..241 CDD:293791 24/36 (67%)
WD40 repeat 247..283 CDD:293791 25/35 (71%)
WD40 repeat 291..327 CDD:293791 25/35 (71%)
WD40 repeat 333..357 CDD:293791 15/23 (65%)
Gnb5NP_113958.1 WD40 56..353 CDD:238121 210/296 (71%)
WD 1 61..100 27/38 (71%)
WD40 repeat 66..103 CDD:293791 27/36 (75%)
WD 2 103..142 27/38 (71%)
WD40 repeat 109..151 CDD:293791 29/41 (71%)
WD 3 151..192 30/40 (75%)
WD40 repeat 156..192 CDD:293791 27/35 (77%)
WD 4 194..236 27/41 (66%)
WD40 repeat 199..236 CDD:293791 24/36 (67%)
WD 5 237..276 27/38 (71%)
WD40 repeat 242..278 CDD:293791 25/35 (71%)
WD 6 278..320 32/41 (78%)
WD40 repeat 286..322 CDD:293791 25/35 (71%)
WD 7 323..352 19/28 (68%)
WD40 repeat 328..352 CDD:293791 15/23 (65%)

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