DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta5 and Gnb2

DIOPT Version :10

Sequence 1:NP_572452.1 Gene:Gbeta5 / 31744 FlyBaseID:FBgn0030011 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_112299.1 Gene:Gnb2 / 81667 RGDID:69319 Length:340 Species:Rattus norvegicus


Alignment Length:340 Identity:164/340 - (48%)
Similarity:241/340 - (70%) Gaps:3/340 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KMASLVREAENLKTKLEEERQKLNDVNLSNIAERLEQIAYVNIKPRKVLKGHQAKVLCTDWSPDK 82
            ::..|.:|||.|:.::.:.|:...|..|:.|...|:.:..:.::.|:.|:||.||:....|..|.
  Rat     3 ELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDS 67

  Fly    83 RHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYPITSDEEM 147
            |.::|:||||:|||||::||||.||:.:.::|:|.|||||||||||||||||..::|.:.:.|..
  Rat    68 RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGN 132

  Fly   148 AAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNE 212
            ....|.:..||.|:|||.:.: |.||:|.|||:||||||:|:||....|.|||||||::.|||: 
  Rat   133 VRVSRELPGHTGYLSCCRFLD-DNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD- 195

  Fly   213 TGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADR 277
             |.|||||:||....:||:|.....|:|.||:||:|:|.|.|.|.|..|||||::|||:|:|||:
  Rat   196 -GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQ 259

  Fly   278 EVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDG 342
            |:.:::.::||.|:.||.||.|||||.|||:|:..|:||.:|.:|..:|.||:|:|||:.|:.||
  Rat   260 ELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDG 324

  Fly   343 TALSTGSWDYTIRVW 357
            .|::|||||..:::|
  Rat   325 MAVATGSWDSFLKIW 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta5NP_572452.1 WD40 62..358 CDD:238121 154/296 (52%)
WD40 repeat 73..110 CDD:293791 19/36 (53%)
WD40 repeat 116..156 CDD:293791 21/39 (54%)
WD40 repeat 161..197 CDD:293791 19/35 (54%)
WD40 repeat 204..241 CDD:293791 16/36 (44%)
WD40 repeat 247..283 CDD:293791 19/35 (54%)
WD40 repeat 291..327 CDD:293791 18/35 (51%)
WD40 repeat 333..357 CDD:293791 12/23 (52%)
Gnb2NP_112299.1 WD40 48..340 CDD:238121 154/295 (52%)
WD 1 53..83 15/29 (52%)
WD40 repeat 58..95 CDD:293791 19/36 (53%)
WD 2 95..125 19/29 (66%)
WD40 repeat 101..141 CDD:293791 21/39 (54%)
WD 3 141..170 17/29 (59%)
WD40 repeat 146..181 CDD:293791 19/35 (54%)
WD 4 182..212 18/31 (58%)
WD40 repeat 188..223 CDD:293791 16/36 (44%)
WD 5 224..254 18/29 (62%)
WD40 repeat 229..265 CDD:293791 19/35 (54%)
WD 6 268..298 17/29 (59%)
WD40 repeat 273..309 CDD:293791 18/35 (51%)
WD 7 310..340 16/30 (53%)
WD40 repeat 315..339 CDD:293791 12/23 (52%)

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