DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta5 and gnb2

DIOPT Version :9

Sequence 1:NP_572452.1 Gene:Gbeta5 / 31744 FlyBaseID:FBgn0030011 Length:358 Species:Drosophila melanogaster
Sequence 2:XP_005165361.1 Gene:gnb2 / 541370 ZFINID:ZDB-GENE-050320-65 Length:344 Species:Danio rerio


Alignment Length:344 Identity:163/344 - (47%)
Similarity:239/344 - (69%) Gaps:7/344 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KMASLVREAENLKTKLEEERQKLNDVNLSNIAERLEQIAYVNIKPRKVLKGHQAKVLCTDWSPDK 82
            ::..|.:|||.|:.::.:.|:...|..|:.|...|:.:..:.::.|:.|:||.||:....|..|.
Zfish     3 ELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDS 67

  Fly    83 RHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYPITSDEEM 147
            |.::|:||||:|||||::||||.||:.:.::|:|.|||||||||||||||||..::|.:.:.|..
Zfish    68 RLLVSASQDGKLIIWDSYTTNKIHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGN 132

  Fly   148 AAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNE 212
            ....|.:..||.|:|||.:.: |.||:|.|||:||||||:|:||....|.|||||||::.|||: 
Zfish   133 VRVSRELPGHTGYLSCCRFID-DNQIITSSGDTTCALWDIETGQQTTLFSGHSGDVMSLSLAPD- 195

  Fly   213 TGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADR 277
             ..||:||:||....:||:|.....|:|.||:||:|:..|.|.|.|.||||||::|||:|:|||:
Zfish   196 -SRTFISGACDASIKLWDIRDSMCRQTFTGHESDINAACFFPSGSAFATGSDDATCRLFDLRADQ 259

  Fly   278 EVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSER----VCLLYGHENKVSCVQV 338
            |:.:::.::||.|:.||.||.|||||.|||:|:..|:||.:|.||    ..:|.||:|:|||:.|
Zfish   260 ELCLYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGERAGKHTGVLAGHDNRVSCLGV 324

  Fly   339 SPDGTALSTGSWDYTIRVW 357
            :.||.|:.|||||..:::|
Zfish   325 TDDGMAVCTGSWDSFLKIW 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta5NP_572452.1 WD40 62..358 CDD:238121 153/300 (51%)
WD40 repeat 73..110 CDD:293791 19/36 (53%)
WD40 repeat 116..156 CDD:293791 21/39 (54%)
WD40 repeat 161..197 CDD:293791 19/35 (54%)
WD40 repeat 204..241 CDD:293791 14/36 (39%)
WD40 repeat 247..283 CDD:293791 19/35 (54%)
WD40 repeat 291..327 CDD:293791 19/39 (49%)
WD40 repeat 333..357 CDD:293791 12/23 (52%)
gnb2XP_005165361.1 WD40 48..344 CDD:238121 153/299 (51%)
WD40 <49..344 CDD:225201 152/298 (51%)
WD40 repeat 58..95 CDD:293791 19/36 (53%)
WD40 repeat 101..141 CDD:293791 21/39 (54%)
WD40 repeat 146..181 CDD:293791 19/35 (54%)
WD40 repeat 188..223 CDD:293791 14/36 (39%)
WD40 repeat 229..265 CDD:293791 19/35 (54%)
WD40 repeat 273..313 CDD:293791 19/39 (49%)
WD40 repeat 319..343 CDD:293791 12/23 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X182
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.820

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