DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta5 and gnb3a

DIOPT Version :9

Sequence 1:NP_572452.1 Gene:Gbeta5 / 31744 FlyBaseID:FBgn0030011 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_001002437.1 Gene:gnb3a / 436710 ZFINID:ZDB-GENE-040718-134 Length:340 Species:Danio rerio


Alignment Length:340 Identity:159/340 - (46%)
Similarity:234/340 - (68%) Gaps:3/340 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KMASLVREAENLKTKLEEERQKLNDVNLSNIAERLEQIAYVNIKPRKVLKGHQAKVLCTDWSPDK 82
            :|..|.:|||.||..:...|:.:.|:.|.:.......:..|.:|.||.|:||.||:....|..|.
Zfish     3 EMEQLRKEAEKLKDDITAARKTVQDLTLQDHVAGTAVVGRVQLKTRKTLRGHLAKIYAMHWGTDS 67

  Fly    83 RHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYPITSDEEM 147
            :..:|:||||:||:||::||||.||:.:.::|:|.|:||||||.||||||||..::|.:.:.:..
Zfish    68 KLCVSASQDGKLIVWDSYTTNKVHAIPLKSSWVMTCSYAPSGNMVACGGLDNMCSIYNLKAKDGN 132

  Fly   148 AAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNE 212
            ....|.:..||.|:|||.: .||.:|:|.|||.||.|||:|:|.....|.||.||.|::.::|: 
Zfish   133 VKVMRELAAHTGYLSCCRF-LSDSEIITSSGDCTCVLWDIETGSQKTVFAGHLGDCMSLAVSPD- 195

  Fly   213 TGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADR 277
             .|||:||:||..|.:||:|.|...|:|.||:||:|::.|.|.|:|:.|||||:||:|||:|:|:
Zfish   196 -FNTFISGACDFTAKLWDIREGQCRQTFGGHESDINAIGFFPNGNAVITGSDDASCKLYDLRSDQ 259

  Fly   278 EVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDG 342
            |:..:...||:.||.|:..|:||||:.|||:|:..|:||:||||||.:|.||:|:|||:.|:|||
Zfish   260 ELITYQDSSIMCGVTSIAPSLSGRLILAGYDDFNCNIWDSLKSERVGVLSGHDNRVSCIGVTPDG 324

  Fly   343 TALSTGSWDYTIRVW 357
            .|..|||||..:::|
Zfish   325 MACCTGSWDSFLKIW 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta5NP_572452.1 WD40 62..358 CDD:238121 147/296 (50%)
WD40 repeat 73..110 CDD:293791 17/36 (47%)
WD40 repeat 116..156 CDD:293791 18/39 (46%)
WD40 repeat 161..197 CDD:293791 17/35 (49%)
WD40 repeat 204..241 CDD:293791 15/36 (42%)
WD40 repeat 247..283 CDD:293791 18/35 (51%)
WD40 repeat 291..327 CDD:293791 20/35 (57%)
WD40 repeat 333..357 CDD:293791 13/23 (57%)
gnb3aNP_001002437.1 WD40 48..340 CDD:238121 147/295 (50%)
WD40 repeat 58..95 CDD:293791 17/36 (47%)
WD40 repeat 101..141 CDD:293791 18/39 (46%)
WD40 repeat 146..181 CDD:293791 17/35 (49%)
WD40 repeat 188..223 CDD:293791 15/36 (42%)
WD40 repeat 229..265 CDD:293791 18/35 (51%)
WD40 repeat 273..309 CDD:293791 20/35 (57%)
WD40 repeat 315..339 CDD:293791 13/23 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X182
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.820

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