DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta5 and gnb5b

DIOPT Version :9

Sequence 1:NP_572452.1 Gene:Gbeta5 / 31744 FlyBaseID:FBgn0030011 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_957040.1 Gene:gnb5b / 393719 ZFINID:ZDB-GENE-040426-1712 Length:395 Species:Danio rerio


Alignment Length:344 Identity:230/344 - (66%)
Similarity:285/344 - (82%) Gaps:2/344 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EKMASLVREAENLKTKLEEERQKLNDVNLSNIAERLEQIAYVNIKPRKVLKGHQAKVLCTDWSPD 81
            |.:.||..|:|:||.||||||.||:||.|..:||::|.:....:|.|:.||||..||||.||..|
Zfish    52 ETVQSLKAESESLKAKLEEERAKLHDVELHQVAEKMEALGQFVMKTRRTLKGHGNKVLCMDWCRD 116

  Fly    82 KRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYPITSD-- 144
            ||.|:||||||::|:|||:|||||||||||.||:|||||||||..|||||||||.:|||::.|  
Zfish   117 KRRIVSSSQDGKVIVWDAYTTNKEHAVTMPCTWVMACAYAPSGCAVACGGLDNKCSVYPLSLDKN 181

  Fly   145 EEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLA 209
            |.:|:||::|..||:|:|.|.:..||.||||.|||.||||||||||||||||||||.||:::|||
Zfish   182 ENLASKKKSVAMHTNYLSSCSFTKSDMQILTSSGDGTCALWDVESGQLLQSFHGHSADVLSLDLA 246

  Fly   210 PNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMR 274
            |:|||:|||||.||:.|.:||||||..|||||.|.||:||||::|.|||.|:||||::|||||:|
Zfish   247 PSETGSTFVSGGCDKKANVWDMRSGQNVQSFETHDSDINSVKYYPSGDAFASGSDDATCRLYDLR 311

  Fly   275 ADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVS 339
            ||||||:::|:|||||.:|||||:||||||||||||.:|:||.||..||.:|:||||:||.|:||
Zfish   312 ADREVAIYSKDSIIFGASSVDFSLSGRLLFAGYNDYNINVWDVLKGTRVAILFGHENRVSTVRVS 376

  Fly   340 PDGTALSTGSWDYTIRVWA 358
            |||||..:||||.|:|:||
Zfish   377 PDGTAFCSGSWDNTLRIWA 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta5NP_572452.1 WD40 62..358 CDD:238121 206/297 (69%)
WD40 repeat 73..110 CDD:293791 27/36 (75%)
WD40 repeat 116..156 CDD:293791 27/41 (66%)
WD40 repeat 161..197 CDD:293791 26/35 (74%)
WD40 repeat 204..241 CDD:293791 24/36 (67%)
WD40 repeat 247..283 CDD:293791 25/35 (71%)
WD40 repeat 291..327 CDD:293791 24/35 (69%)
WD40 repeat 333..357 CDD:293791 16/23 (70%)
gnb5bNP_957040.1 WD40 98..395 CDD:238121 206/296 (70%)
WD 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00221 103..142 27/38 (71%)
WD40 repeat 108..145 CDD:293791 27/36 (75%)
WD 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00221 145..184 27/38 (71%)
WD40 repeat 151..193 CDD:293791 27/41 (66%)
WD 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00221 193..234 29/40 (73%)
WD40 repeat 198..234 CDD:293791 26/35 (74%)
WD 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00221 235..276 27/40 (68%)
WD40 repeat 241..278 CDD:293791 24/36 (67%)
WD 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00221 279..318 27/38 (71%)
WD40 repeat 284..320 CDD:293791 25/35 (71%)
WD 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00221 320..362 30/41 (73%)
WD40 repeat 328..364 CDD:293791 24/35 (69%)
WD 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00221 365..395 20/29 (69%)
WD40 repeat 370..394 CDD:293791 16/23 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594726
Domainoid 1 1.000 89 1.000 Domainoid score I7831
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40714
Inparanoid 1 1.050 505 1.000 Inparanoid score I1305
OMA 1 1.010 - - QHG48070
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 1 1.000 - - otm24785
orthoMCL 1 0.900 - - OOG6_107558
Panther 1 1.100 - - O PTHR19850
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X182
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

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