DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta5 and Gbeta13F

DIOPT Version :9

Sequence 1:NP_572452.1 Gene:Gbeta5 / 31744 FlyBaseID:FBgn0030011 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_001303567.1 Gene:Gbeta13F / 32544 FlyBaseID:FBgn0001105 Length:340 Species:Drosophila melanogaster


Alignment Length:340 Identity:168/340 - (49%)
Similarity:244/340 - (71%) Gaps:3/340 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KMASLVREAENLKTKLEEERQKLNDVNLSNIAERLEQIAYVNIKPRKVLKGHQAKVLCTDWSPDK 82
            ::.||.:|||:||..:.:.|:...|.:|...|..||.|..:.::.|:.|:||.||:....|..|.
  Fly     3 ELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGNDS 67

  Fly    83 RHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYPITSDEEM 147
            |:::|:||||:||:||:.||||.||:.:.::|:|.|||||||::||||||||..::|.:.:.|..
  Fly    68 RNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTREGN 132

  Fly   148 AAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNE 212
            ....|.:..|..|:|||.:.: |.||:|.|||.:|.|||:|:|..:.||.||:|||||:.|||. 
  Fly   133 VRVSRELPGHGGYLSCCRFLD-DNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQ- 195

  Fly   213 TGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADR 277
             ..|||||:||..|.:||:|.|...|:|.||:||:|:|.|.|.|.|.||||||::|||:|:|||:
  Fly   196 -CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQ 259

  Fly   278 EVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDG 342
            |:|:::.::||.|:.||.||.|||||.|||:|:..|:|||:|:||..:|.||:|:|||:.|:.:|
  Fly   260 ELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENG 324

  Fly   343 TALSTGSWDYTIRVW 357
            .|::|||||..:|||
  Fly   325 MAVATGSWDSFLRVW 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta5NP_572452.1 WD40 62..358 CDD:238121 154/296 (52%)
WD40 repeat 73..110 CDD:293791 18/36 (50%)
WD40 repeat 116..156 CDD:293791 19/39 (49%)
WD40 repeat 161..197 CDD:293791 17/35 (49%)
WD40 repeat 204..241 CDD:293791 18/36 (50%)
WD40 repeat 247..283 CDD:293791 21/35 (60%)
WD40 repeat 291..327 CDD:293791 20/35 (57%)
WD40 repeat 333..357 CDD:293791 12/23 (52%)
Gbeta13FNP_001303567.1 WD40 48..340 CDD:238121 154/295 (52%)
WD40 repeat 58..95 CDD:293791 18/36 (50%)
WD40 repeat 101..141 CDD:293791 19/39 (49%)
WD40 repeat 146..181 CDD:293791 17/35 (49%)
WD40 repeat 188..223 CDD:293791 18/36 (50%)
WD40 repeat 229..265 CDD:293791 21/35 (60%)
WD40 repeat 273..309 CDD:293791 20/35 (57%)
WD40 repeat 315..339 CDD:293791 12/23 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468721
Domainoid 1 1.000 47 1.000 Domainoid score I3018
eggNOG 1 0.900 - - E1_KOG0286
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 304 1.000 Inparanoid score I767
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 1 1.000 - - otm3158
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19850
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X182
109.900

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