DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta5 and gpb-2

DIOPT Version :9

Sequence 1:NP_572452.1 Gene:Gbeta5 / 31744 FlyBaseID:FBgn0030011 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_492072.2 Gene:gpb-2 / 172483 WormBaseID:WBGene00001680 Length:369 Species:Caenorhabditis elegans


Alignment Length:361 Identity:218/361 - (60%)
Similarity:285/361 - (78%) Gaps:5/361 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SEAAVPASNANANATEK----MASLVREAENLKTKLEEERQKLNDVNLSNIAERLEQIAYVNIKP 62
            |.:.:| .|:....|||    :..|..|||.|:.||::||.||||:.:...||||:.:..:.:|.
 Worm    10 SSSKMP-ENSQPTTTEKGSEYLEQLANEAEELRKKLDQERHKLNDIPIQQAAERLDVMGALGVKQ 73

  Fly    63 RKVLKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFV 127
            |::||||..||||.|||.|||||:||||||::|:||.||||||||:||||||:||||::||...:
 Worm    74 RRILKGHVGKVLCMDWSLDKRHIVSSSQDGKVIVWDGFTTNKEHALTMPTTWVMACAFSPSSQMI 138

  Fly   128 ACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQL 192
            ||||||||.:|.|::.::::..|||.|.|||||||||.:..||..|||||||||||:||||||||
 Worm   139 ACGGLDNKCSVVPLSFEDDIIQKKRQVATHTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQL 203

  Fly   193 LQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGD 257
            :|:||||:|||.|||:...:|||||:|...|:.:.:||:|||..|||||||::|:|:|:|||.||
 Worm   204 IQNFHGHTGDVFAIDVPKCDTGNTFISAGADKHSLVWDIRSGQCVQSFEGHEADINTVRFHPNGD 268

  Fly   258 AIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSER 322
            |.||||||::|||:|:||||:|.|:.||||:|.||.||||:|||:|||||.||.|.:||:||..|
 Worm   269 AFATGSDDATCRLFDLRADRQVCVYEKESILFPVNGVDFSLSGRILFAGYGDYRVGVWDSLKCAR 333

  Fly   323 VCLLYGHENKVSCVQVSPDGTALSTGSWDYTIRVWA 358
            ..:||||||::||::.||||||:.:.|||.|||:||
 Worm   334 HSVLYGHENRISCLRTSPDGTAVCSASWDCTIRIWA 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta5NP_572452.1 WD40 62..358 CDD:238121 192/295 (65%)
WD40 repeat 73..110 CDD:293791 28/36 (78%)
WD40 repeat 116..156 CDD:293791 20/39 (51%)
WD40 repeat 161..197 CDD:293791 26/35 (74%)
WD40 repeat 204..241 CDD:293791 18/36 (50%)
WD40 repeat 247..283 CDD:293791 24/35 (69%)
WD40 repeat 291..327 CDD:293791 22/35 (63%)
WD40 repeat 333..357 CDD:293791 14/23 (61%)
gpb-2NP_492072.2 WD40 74..369 CDD:238121 192/294 (65%)
WD40 repeat 84..121 CDD:293791 28/36 (78%)
WD40 repeat 127..167 CDD:293791 20/39 (51%)
WD40 repeat 172..208 CDD:293791 26/35 (74%)
WD40 repeat 215..252 CDD:293791 18/36 (50%)
WD40 repeat 258..294 CDD:293791 24/35 (69%)
WD40 repeat 302..338 CDD:293791 22/35 (63%)
WD40 repeat 344..368 CDD:293791 14/23 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166302
Domainoid 1 1.000 42 1.000 Domainoid score I8453
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40714
Inparanoid 1 1.050 485 1.000 Inparanoid score I792
Isobase 1 0.950 - 0 Normalized mean entropy S614
OMA 1 1.010 - - QHG48070
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 1 1.000 - - oto18546
orthoMCL 1 0.900 - - OOG6_107558
Panther 1 1.100 - - LDO PTHR19850
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2536
SonicParanoid 1 1.000 - - X182
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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